Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01514 ATGGCACCAACAAGGAAATCTAGAAGTGTAAATAAGCGGATGTCAAGTTCAAATGACAATTCCCCTGAGAAAGATGGAGTTAATTCAAATAAAAGCAAGCAACGGAAGAGAAAGTTGACTGATAAATTGGGATCTCAGTGGAGCAAGGAGGAACTTGAGCGATTTTATGAAGCATATAGGAAGTATGGGAAAGATTGGAAGAAGGTGGCTGCTGTTGTACGCAATAGATCCACTGAAATGGTTGAAGCTCTTTACAGTATGAATCGGGCATACCTCTCTCTGCCAGAGGGGACGGCTTCTGTTGTTGGCCTTATAGCGATGATGACGGATCATTACAATGTGATGGAAGGGAGTGATAGTGAAAGGGAGAGCAATGATGCACCAGGATCTCGAAAACCTGTAAAACGAAAGCGTGAAAAAGTTCAGCTTAGTATCTCTAAAGATCAGTCTCATTCAATTGCTTCTAGTGATGATTGCCTCTCTATATTGAAGAAGAGACGCTTTGATGGTATCCAGCTCAAGCCTCATGCGGTTGGTAAAAGGACTCCTCGCGTCCCGGTTTATAAGAAAGATGATACAGAAAATTATGTTTCACCTTATAGAAGAAGCCTGAAGTCGACTATTGATGCTAATGATGATGAAGTTGCACATGTTGTAGCTTTGGCATTAACTGAGGCTGCACAAAGGGGAGGCTCTCCCCAAGTTTCTCAAACACCATCTAGAAGAGTAGAGCAAAAATCCTCTCCCATTCAGAGCTGGGAAAGAAAGCACCAAATGTCAAAGACAGCTCGTGCAAAGTTTCCTGATGTTTCTGTGGATAAAGAGGTTTTAGAAGGTAGTATAGAAAGCAGGGGAGCTGAAAATGAAGAATATGCAAAAGATAATAGTTCATTGATGGATACAGAAGGAATAGACACTGCTGAAGTTTTTCAGAAAGAGGGACAATTTTATAGAAAGAGAGAGAGAGTGAAAAATGTGGGAAATCATCAACTTGATGATGGTGGGGAAGCATGTAGCGGCACTGAAGAAGGACTTAGTTTTAATTCACTAAAGGAAAAGGTTGATATTGAGGTTACTAATGAAAAACTTGAAAAATTCTCTCCAAAAAGTCACAGGAAAAGAAACAAGAAACTCTTCTTTGGAGATGAAACCCCTGCCTTGAATGCGTTGCAAACTTTGGCTGATCTGTCTCTAATGATGCCAATATCTACTATGGAATCTGAATCATCTATCCAGTTGAAGGGCGAAAGAATGGTTGCTGATAAGAATAATAGGTCTGCTTTACCCGAAGCAACATCAACAAGCCATAAGAGACATAAACTTAAATACAGTGTGGTACCTAAAATTGAGGTTTTGACCTCCAAAGAGTCTAAGACTGGAAAGGAACCGACAAAGGATACTAATGCTCTCTCTGAATCGAAAGAAAAACTTCCATTTGCTGATACAGCATGGAAAAGAAAGCGGAAGTCTATGGGTTCAAAGGTTGCAAGTGCAAAGCTTGATTCATATCCAAGTGGTCCCTTGAAAGATGAGGCCTTAGATGATGGTAACAAACCGGTGGTTAAAGGAAAACACACGGATCAGGCTTTTACCCTACCAAAGCAATTGAAGACAGTTAAGTCGTCAGAGAGTTCCTTGTGTAGTGATCAGAAAGATTTAACAGTATCAACGGCAGAAATTCCACTTTTGAATGAAGTTAGTTTACCAACTAAACAAAGAAAACGAAAGATGATTTTACAGAGAACTTCCTTGCCTAAGGAAAAGTCTTCTGATTACATATTGAAAAGTCAATCTAACAAGTACTCCACCCTAAAGGAAAAGCTTTCTAGTTGCTTGTCATCTAATATGGTTCGCAGATGGTTTGTTTTTGAATGGTTTTATAGTGCAATTGATTATCCATGGTTTGCCAAAAGGGAATTCATGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGGTTAACTCGTGTCGAGTGGAGTGTCATAAAAAGTTCCCTTGGCAAACCCCGCAGGTTTTCTGAACACTTTCTATGTGAAGAAAGGCAAAAACTTGAACAGTATCGGGAATCAGTGAGGAAACATTACACTGAACTGCGGACTGGTATTAGGGATGGACTTCCAACAGATTTAGCCAAACCATTATATGTTGGACAACATGTAATTGCTCTTCATCCAAAAACAAGAGAGATTCATGATGGTAGTGTGCTTACCGTTGACTATGACAAGTGCAGGATTCAGTTTGACCGTCCTGAATTAGGTGTTGAATTTGTAATGGACATTGATTGCATGCCTTTGAATTCATCAGATAATATGCCAGAAGCTCTGAGGAGGCATATTGGTTCCCCAATATCCTCTTTCATGAATAAAGAGCCACAAATTAGTGGAAATTCAAATTTTGGGGGGTGCGAAATGAATCATTCCTCACCCGTGAAGGCAAAGGTTGCTACCGTTGATAATCTCTGTGCACAAGCAGGTTGTGCTCAACCATGTAAAGTAACACACCATCAAGCTAAGGAAGCTGACATACAGGCAGTTTCTGAACTAAAGCATGCTCTAGATAAAAAGGAGACATTGTTGATGGAGCTTCGAAGTGCAAATAGCGACATATTGGAAAACAAAAATGGCATAGACTGCTTAAAAGATTCTGAGGTTTTCAAGAAGCATTATGCGACGGTACTGTTACAGCTAAAGGAAGCCAGTGGACAGGTTTCTGATGCTATGCTACAACTGAGGCAACGCAATACTTACAGAGGAAACTCTCTGCCATCCTGGATGAAGCCACAAGCAAGTTTCAATGTTCATGATGATCTTCCCAGTATGTTGGATAGTTCTCTGACACAAGAGTTAGGGTCAACTGTTGTTCAAGTTATTAAAGGATCCAGGCTAAGGGCACATGCAATGGTAGATGCTGCATTTCAGGCATTGTCTTTGGCAAAGGAAGGTGAAGATGCTTTCATAAAGATTGGGCAAGCATTGGATTCTATAAATCATCAGCAGTTAGCCTCCCAGTCTAGGTTACCCGTGATCAGGTCTCAAGAGCAAGTGAACGCGAATGGCAGTTTTTATCATCTTAATCATTCAACTAGCGGTGTATCAGAACCTATACTTAATGATCCATCGCTTCCAAAACCACATAATTGTTCTGACAAATTTGATACTGAACTTCCATCAGATCTTATCACTTCGTGTGTTGCTACATTAATCATGATTCAGACTTGTACTGAACGGCAATACCCTCCAGCTGATGTGGCTCAGATATTAGATTCTGCCGTTACCAGTCTGCATCCATGCTGTTCTCAAAACCTTCCTATTTATAGAGAAATTCAAATGTGCATGGGAAGAATCAAAACGCAGATGTTAGCTCTCATCCCTACTTGA 3381 0.4037 MAPTRKSRSVNKRMSSSNDNSPEKDGVNSNKSKQRKRKLTDKLGSQWSKEELERFYEAYRKYGKDWKKVAAVVRNRSTEMVEALYSMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSERESNDAPGSRKPVKRKREKVQLSISKDQSHSIASSDDCLSILKKRRFDGIQLKPHAVGKRTPRVPVYKKDDTENYVSPYRRSLKSTIDANDDEVAHVVALALTEAAQRGGSPQVSQTPSRRVEQKSSPIQSWERKHQMSKTARAKFPDVSVDKEVLEGSIESRGAENEEYAKDNSSLMDTEGIDTAEVFQKEGQFYRKRERVKNVGNHQLDDGGEACSGTEEGLSFNSLKEKVDIEVTNEKLEKFSPKSHRKRNKKLFFGDETPALNALQTLADLSLMMPISTMESESSIQLKGERMVADKNNRSALPEATSTSHKRHKLKYSVVPKIEVLTSKESKTGKEPTKDTNALSESKEKLPFADTAWKRKRKSMGSKVASAKLDSYPSGPLKDEALDDGNKPVVKGKHTDQAFTLPKQLKTVKSSESSLCSDQKDLTVSTAEIPLLNEVSLPTKQRKRKMILQRTSLPKEKSSDYILKSQSNKYSTLKEKLSSCLSSNMVRRWFVFEWFYSAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLCEERQKLEQYRESVRKHYTELRTGIRDGLPTDLAKPLYVGQHVIALHPKTREIHDGSVLTVDYDKCRIQFDRPELGVEFVMDIDCMPLNSSDNMPEALRRHIGSPISSFMNKEPQISGNSNFGGCEMNHSSPVKAKVATVDNLCAQAGCAQPCKVTHHQAKEADIQAVSELKHALDKKETLLMELRSANSDILENKNGIDCLKDSEVFKKHYATVLLQLKEASGQVSDAMLQLRQRNTYRGNSLPSWMKPQASFNVHDDLPSMLDSSLTQELGSTVVQVIKGSRLRAHAMVDAAFQALSLAKEGEDAFIKIGQALDSINHQQLASQSRLPVIRSQEQVNANGSFYHLNHSTSGVSEPILNDPSLPKPHNCSDKFDTELPSDLITSCVATLIMIQTCTERQYPPADVAQILDSAVTSLHPCCSQNLPIYREIQMCMGRIKTQMLALIPT 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01514 1126 MobiDBLite consensus disorder prediction 116 149 - -
Gma10g01514 1126 MobiDBLite consensus disorder prediction 1 25 - -
Gma10g01514 1126 Pfam DIRP 625 726 IPR033471 -
Gma10g01514 1126 Coils Coil 846 866 - -
Gma10g01514 1126 MobiDBLite consensus disorder prediction 1 42 - -
Gma10g01514 1126 MobiDBLite consensus disorder prediction 454 488 - -
Gma10g01514 1126 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 1 1126 IPR028306 -
Gma10g01514 1126 SMART sant 43 91 IPR001005 -
Gma10g01514 1126 ProSiteProfiles SANT domain profile. 42 79 IPR017884 -
Gma10g01514 1126 Gene3D - 2 99 - -
Gma10g01514 1126 MobiDBLite consensus disorder prediction 116 145 - -
Gma10g01514 1126 MobiDBLite consensus disorder prediction 26 42 - -
Gma10g01514 1126 PANTHER LIN-9 1 1126 IPR010561 GO:0006351|GO:0017053
Gma10g01514 1126 SMART DIRP_2 626 727 IPR033471 -
Gma10g01514 1126 MobiDBLite consensus disorder prediction 229 256 - -
Gma10g01514 1126 MobiDBLite consensus disorder prediction 227 265 - -
Gma10g01514 1126 SUPERFAMILY Homeodomain-like 41 89 IPR009057 -
Gma10g01514 1126 MobiDBLite consensus disorder prediction 454 526 - -
Gma10g01514 1126 CDD SANT 47 81 IPR001005 -
Gma10g01514 1126 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 81 IPR017930 -
Gma10g01514 1126 Pfam Myb-like DNA-binding domain 45 81 IPR001005 -
Gma10g01514 1126 ProSiteProfiles Myb-like domain profile. 45 85 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01514 Gma-Chr10 42279734 42293356 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma10g01514 DIRP 1.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01514 - - gmx:100816217 2234.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01514 10 42279734 42293356 Gma10g01514 10 42279734 42293356 ECH
Gma10g01514 10 42279734 42293356 Gma20g02192 20 49013045 49028586 GST