Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01500 ATGGGGTGTGGTGGTTCTGAGCATGTTACCATGATCTTTATCATCACCATCTTGATCCTCCTATCATCACAAAGCACCAACATTTTGACTGTGGCTGGTTCTGTATTCAATGCAGTTGGAAACTTCCAGGTTCATGGCCTACCAGAGATGTATTTCATTGAAGAGAATGATGAAAAGCTGGTTAAGAAAATCTCAGGAATAGATGAGAATGAAAAGAAGCAAGCCTTAATAGTGGAGAAGTTTAGATCCTTGCTTGGACTCAAGAGTTTCCACACCAAAGTACCATTCAACGGTGATTTGGAGTTTCTCTCTCCCTCACCTTCTCCATCACCTATCATTGAAGAAACTCAGGCTCCAGCTCCTTCTCCTTCTCCTCTTCCACACGTGCACCATCATTCACACCATCCACCACATCATAAGAATCCATCACTTCACCAAACTCATCATGAAGATAGAGGCAGGGCTAAGAGAATACTAATAGCTGTTCTTGTATCTGCTGGAGTTGCTATATTGATTGGTGCTTGTGGGCTATTCTTGGTGTGGAGGAAATTCTCAAATCATACAAAGAAAACCAAAAGGACAATGCCACTATATAATAGCAAGAGCAAAGGAAGTGGAGGTGTTTATCAAAGTTCATCAAGCAAGGTAAGTTTAAACTCTGAACTAGATCTGTTTTATCTTAATGCTTTAGGTGAGGACATAGAGCAACACTCTTGCAGCTTCAAAAAGACTCGCGAGGATGGTTTAGAATATGATATTGTTAGCGGTTCTTCCATGAAGGATATTGCATCTGTTCATGAAGATGAGGAAGCAGTTAAAGGTGAAGGTGAAGGTGAATCTGATGGCGGCAACTCTTCTTCTGGGGATAAAATTATCCCTAAAGATTGTCATTCATCAGACAATGAAAGTTTTCATTCCTTTGTTAATGATTCACACTCAAATAGTAATAGACTCTCCAATGCTTCCGCTTGTAGTCTTAGTGACACAAACTCTCTGTCCCGTCAAAATTCAAGTTCATTACCAAACCCACAATTTCCTAGTTCTCAACATAACTTAATGTCAAATATACAACCTCACCAATCACCAAATAGTGCAAAACATGATCAAGAGAAAGAGATTGAAACCTCTCTCCAATGTCCAAAGACATTCACTTCCcctccacctcctccaccaccaccaccacctccaccaTTGCGAATGCCATTATTTTCTTTGCATTCTCTCACTTCTTCATCTAGACTCTCCTCTCACTCCCCACTTTCCTTGACATCTAATAATTTATCATCCCTGGTAAATTCAGACACTTCCTCGTGTTCAAATCAAAGTCCAGAAAAGGAGTTGCCTTCTCCAAATAGACCTTACCCTACACAATCTCCTCCCAACATTCCCCCACCACCATGTCCACCTCCATTTCTTAAGGGCAATAGTGTCAAAACCCCACCTCCTCCACCTTCTCAACTCCCTCAATTTACCCCTCTTGGTAAAGATGGTGCACCATTGCCAAAACTCAAACCACTTCACTGGGACAAAGTCAGAGCTGCACCAAATCGCACAATGGTTTGGGACAAGCTACGGTCGAGTTCATTCGAGTTGGACGAGGAAATGATCGAGTCTCTATTTGGTTACAATTTGCAAAATTCAATTAAGAATGACGAAGCAAAGAGTAAAACCCCGTCTCCAGGCAAGCATGTACTTGAGCCAAAACGCCTGCAGAACATAACTATACTCTCCAAAGCTCTGAATGCAACAGCTGAGCATGTCTGCGAGGCCTTAATGCAAGGGAAGGGGTTGTCTTTGCCCCAACTAGAGGCACTAGTGAAAATGGTACCCACCAAGGAGGAAGAGTCCAAGCTCTTCAATTATAAAGGTGACATCAATGAATTGGGGTCCGCCGAAAGGTTCGTGAGGGCAATGCTCGATGTGCCATTTGCCTTTCAAAGAGTAGAAGGCATGCTTTTCAGAGAAACATTTGACGATGAAGTAGTTCACCTCAGGAACTCATTTTCAATGCTTGAGGAAGCATGCAAGGAACTAAGATCAAGCAGGCTCTTCTTGAAGTTACTAGAAGCAGTGCTCAAAACGGGAAACCGAATGAACGTTGGAACAACCAGAGGAGGTGCTAGAGCATTTAAACTCGATGCACTTCTCAAGCTTGCAGATGTTAAGGGAACTGATGGGAAAACCACGTTGCTCCATTTCGTTGTTCAGGAGATTGTTCGTTCTGAAGGAATAAGAGTTTCAGACAGCATTATGGGGAAAATCAGCCAAAGAAGTAAGAACAGAACGGAGGAAGAGAAGGAAGAAGATTACAAAAGGATGGGACTAGAACTTGTTTCTGGTCTCAGCACTGAGTTATACAACGTGAAAAAAACAGCTACCATTGACTTGGACGTTCTTGCAAGCTCTGTGTCAAACCTATCAGAAGGAATGAACAAGCTGCAACATCTAGTGGATAAGGAGTTGCATAAGGACGAGAGAAGCATGAACTTTGTGCAGTGTATGAAGTCATTCCTTAACTATGCTGATGGAAACTTGAAGGAGTTGCGTGGAGATGAAGATATAGTGTTGGCACGCGTGAAAGAAATTACGGAGTATTTTCATGGGGATGTGATCAGCAAAGAAGATGCAAACCCACTTAGGATATTTGTGATTGTGAGAGATTTTCTGGGGAGTTTAGATAATGTGTGTAAAGAACTTAGAAGGTCTAAAGCTCCACGTAGCCTGAACCCTCTTGCTATTCTCCCTTTAGATAGATCCTAG 2760 0.4152 MGCGGSEHVTMIFIITILILLSSQSTNILTVAGSVFNAVGNFQVHGLPEMYFIEENDEKLVKKISGIDENEKKQALIVEKFRSLLGLKSFHTKVPFNGDLEFLSPSPSPSPIIEETQAPAPSPSPLPHVHHHSHHPPHHKNPSLHQTHHEDRGRAKRILIAVLVSAGVAILIGACGLFLVWRKFSNHTKKTKRTMPLYNSKSKGSGGVYQSSSSKVSLNSELDLFYLNALGEDIEQHSCSFKKTREDGLEYDIVSGSSMKDIASVHEDEEAVKGEGEGESDGGNSSSGDKIIPKDCHSSDNESFHSFVNDSHSNSNRLSNASACSLSDTNSLSRQNSSSLPNPQFPSSQHNLMSNIQPHQSPNSAKHDQEKEIETSLQCPKTFTSPPPPPPPPPPPPLRMPLFSLHSLTSSSRLSSHSPLSLTSNNLSSLVNSDTSSCSNQSPEKELPSPNRPYPTQSPPNIPPPPCPPPFLKGNSVKTPPPPPSQLPQFTPLGKDGAPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQNSIKNDEAKSKTPSPGKHVLEPKRLQNITILSKALNATAEHVCEALMQGKGLSLPQLEALVKMVPTKEEESKLFNYKGDINELGSAERFVRAMLDVPFAFQRVEGMLFRETFDDEVVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTTRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGKISQRSKNRTEEEKEEDYKRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLSEGMNKLQHLVDKELHKDERSMNFVQCMKSFLNYADGNLKELRGDEDIVLARVKEITEYFHGDVISKEDANPLRIFVIVRDFLGSLDNVCKELRRSKAPRSLNPLAILPLDRS 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01500 919 SUPERFAMILY Formin homology 2 domain (FH2 domain) 506 903 - -
Gma10g01500 919 MobiDBLite consensus disorder prediction 428 504 - -
Gma10g01500 919 Pfam Formin Homology 2 Domain 497 892 IPR015425 -
Gma10g01500 919 MobiDBLite consensus disorder prediction 302 363 - -
Gma10g01500 919 MobiDBLite consensus disorder prediction 111 151 - -
Gma10g01500 919 MobiDBLite consensus disorder prediction 128 142 - -
Gma10g01500 919 MobiDBLite consensus disorder prediction 112 126 - -
Gma10g01500 919 ProSiteProfiles Formin homology-2 (FH2) domain profile. 493 918 IPR015425 -
Gma10g01500 919 MobiDBLite consensus disorder prediction 382 401 - -
Gma10g01500 919 MobiDBLite consensus disorder prediction 262 403 - -
Gma10g01500 919 PANTHER FORMIN-RELATED 56 315 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma10g01500 919 PANTHER FORMIN-RELATED 387 912 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma10g01500 919 Gene3D Formin, FH2 domain 516 908 IPR042201 -
Gma10g01500 919 PANTHER FORMIN-LIKE PROTEIN 387 912 - -
Gma10g01500 919 PANTHER FORMIN-LIKE PROTEIN 56 315 - -
Gma10g01500 919 SMART it6_source 493 907 IPR015425 -
Gma10g01500 919 MobiDBLite consensus disorder prediction 262 277 - -
Gma10g01500 919 MobiDBLite consensus disorder prediction 448 489 - -
Gma10g01500 919 MobiDBLite consensus disorder prediction 428 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01500 Gma-Chr10 42113646 42118568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01500 478 912 FH2 protein (formin) Gene Family AT3G05470 74.658 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01500 - - gmx:100811929 1587.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01500 10 42113646 42118568 Gma10g01500 10 42113646 42118568 ECH
Gma10g01500 10 42113646 42118568 Gma20g02206 20 49158333 49161751 GST
Gma19g02215 19 50938669 50942554 Gma10g01500 10 42113646 42118568 PCT
Gma03g02174 03 47190893 47193935 Gma10g01500 10 42113646 42118568 PCT