Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01492 ATGAGTCGAGGAAGTGCAACTGCTGCGAAGGGCAAGAAGAAGGGTGCGACATTCACCATTGATTGCGCGAAGCCGGTGGAGGACAAGATCATGGACATTGCGTCTCTCGAGAAGTTCCTTCAAGAGAGGATTAAGGTTGGTGGCAAGGCCGGTGCTCTCGGCGACTCCATCACCGTCGTACGTGAGAAGACCAAAATCATTGTTACTTCCGACAGCAACTTCTCCAAACGGTACCTCAAGTACTTGACTAAGAAGTACCTGAAGAAGCACAATGTGCGGGACTGGCTCAGAGTGATTGCTTCTAACAAAGATAGAAGCATTTATGAATTGAGGTACTTCAACATTGCTGAGAATGAAGGAGAGGAAGAAGATTAA 375 0.4747 MSRGSATAAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITVVREKTKIIVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSIYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01492 124 Gene3D - 5 124 IPR038526 -
Gma10g01492 124 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 124 - -
Gma10g01492 124 PANTHER 60S RIBOSOMAL PROTEIN L22 1 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Gma10g01492 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01492 Gma-Chr10 42025291 42026506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01492 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 84.677 1.01e-66 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01492 K02891 - gmx:100499952 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01492 10 42025291 42026506 Gma20g02212 20 49228517 49229892 ECH
Gma10g01492 10 42025291 42026506 Gma10g01492 10 42025291 42026506 ECH
Gma10g01492 10 42025291 42026506 Gma20g02212 20 49228517 49229892 GST
Gma19g02203 19 50847813 50849216 Gma10g01492 10 42025291 42026506 PCT
Gma03g02163 03 47099253 47102862 Gma10g01492 10 42025291 42026506 PCT