Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01489 ATGGGGATCGATCTCAAGGCCGGAGGTAAAAGCAAAAAAACCAAAAGAACAGCACCCAAGTCCAATGATATCTATCTTAAGCTCTTGGTCAAGCTTTATCGCTTCCTTGTTCGGAGAACTGGCAGCAAATTCAATGCCGTTATACTCAAGAGATTGTTCATGAGCAAGGTTAACAAGCCCCCATTGTCTTTGTCAAGGTTGATTAAGTATACCAAGGGGAAGGAAGATAAGATTGCTGTGGTGGTGGGCAATATAACCGATGATATTCGTGTTTATGAAGTTCCAGCCTTAAAGGTCACAGCACTCAGGTTTACAGAGACTGCTCGGGCAAGAATTGAGAAGGCAGGTGGTGAATGCTTGACGTTTGATCAGTTGGCTCTCAGGGCTCCTCTGGGACAGAACACGGTCCTTCTTAGAGGCCCAAAGAATGCTCGTGAAGCTGTGAAGCACTTTGGTCCTGCTCCTGGTGTGCCTCACAGCCACACCAAGCCTTATGTTCGAGCAAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAGGAGGAACAGCAGAGGATTTAGGGTTTGA 564 0.4699 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKPPLSLSRLIKYTKGKEDKIAVVVGNITDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGRRNSRGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01489 187 Gene3D - 1 187 - -
Gma10g01489 187 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 186 - -
Gma10g01489 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Gma10g01489 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Gma10g01489 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 186 IPR000039 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01489 Gma-Chr10 41997661 41999703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01489 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 79.032 2.31e-104 296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01489 10 41997661 41999703 Gma20g02214 20 49253907 49256065 GST
Gma19g02198 19 50802765 50804739 Gma10g01489 10 41997661 41999703 PCT
Gma03g02158 03 47058261 47060476 Gma10g01489 10 41997661 41999703 PCT