Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01487 ATGTCGGAGAATCTCGACGCTTCCGAAATCTCGCCGAGCACTTCGTCCGCAAGTCTCGGCGAGACGCCGGAAATTGCCGCCATACCACTCGGAATCGATCTCGTGTCGGCGGCCAGGCGAAATATCTGCTTCTTGAGGACCGTGGCGGATTCTTTGTGGCTTCACCACACGCCCATTATGGTCGAAGCCGTAAGAAGGTACCATGATTTCTGGATGCCGTTGATTGCTGATCTCACGCTGCAAAACTCTTCCCCTCCCATGATTCTTCCTCCCCTTGACATCCACTGGGTTTGGTTCTGTCACACTTTAAACCCCGTGAGTTACAGGGAATACTGTGAAACGAGATTCTCGAAGCTGATTGGCAAAGCGGGAATCTTTGACGAAGAGAACAGAGAGTACGCGTTGATGCGGTGCATGGAGATTTGGAGCAGTAGATACCCGTTGGAGTCGTTTGAGAACGAGGCGAGTTGGGATTCGCAGGATTCGGATACTGTGGCTGTTGTTGGGGGGAGTTTGAAGGAGAGAGTGTTTAAGGAAGTTGAAAAGCAGAGGGTGTTGTTGTGTTCCATGTTTGTAGAACCGTACAGGTCCGAGATGGTGTACTTGATTGCAGCGAGACAGCGATACAAGGCTTTCTTGTTTATGCTGCAGAGGTTCACACGTGAGTTCTCTTCGCGCTTGGTTCCTACTTCGGACATTCTCTTAATGTGGCTGACCCATCAGAGCTACCCAACAGTGTATTGTGAAGATTTGAAAGCATTAGCTATAGAAGGTGATCTGCAGAAGGTGGCAACTCTGTCTGAAACGGTGAAGGAAAAGGAGTCTGAAGAAACCAAGAAGTTGTGGGATAGGGCGTTTAATCAACCTTATGAGAAAGCTGGTGGAGAGGTGCCTTTTATGTTGGACGTTGTTACCTCAATCAAATCCCCTGTCTATTGGGAGGAATCAGGCACAGATGTCAATACAAAATACAGGTCCATGCTTCCAAGATTTTTATTGGAGGCCTGTGTGTTTGTGAGGCTTAAGCAAAGAATAACAACATTGCAGAAGGATATAAACCATGATTTCCTACACCTCCGAATAGTAAGGTGTCATAGTGAACTAAAGCTAGATAAAGCCTTGTCCAAGTTCACCAATGATTCATGGAAAAAAGCTTGGCACTTTTACTGTGAGTTTGGGACTAAGGGAGTTATGTTTGAGTATCGTCGTCATGGTGGTAACTGCCTAAGAGGAAGTAGCCTGCTAGATACTGTTTCGTTCCGCTGGAATGATTTATTGAGAGCAGATTCTTTAACTTTGGAAAAGGAAGTTAGTCAACAGGTGAATGTTGTTACGTCAATAACCCCACCAGTTCAGGCACCATACTTGTTGAAATGTGTACCTGATCGAGTCACTGATGATTCTGGGGCTATGATATCTGATGTGATTCTGAAGATGAATAGTTATCGTCCACAAGAAGGGCGATGGTTGTCTCGCACAGTTCTTGATCATGCAGGGAGAGTGTGTTTTGTTATTAGAATTAGGGTAGGAGGAGGATTTTGGAGAAGAGGGGGTGAAGCTCCTTCAGCTGTAAAATGGGAAGATAGGATTATAGAGATACGGGAAGGATCTTGGTCTTATGTTGCTGGTTACATTGGTAGAGCACCTGAGAAGGTGGTGGCCACTGCAACACCAAAGGAACCTACTGAACAATGTAAAGCTGCATGGTGCTTTTCAACAGGAGATGAACTTACAATACAATGGGAGTCATCACAATCAGTGTCAGGTCTCACCTTTAGTTTGCTAAATCAAACATCTCTAGAGTCATCGGTACAGTTATTGAGAGGGAGGCAGATGCAATATCAAGTAAAGAAAACAAAGTCAAAGAGAAAAGGCGAAGACATGAAAATCGAGTTAGAGGAGAAAGAGATCGAGGGAGAAGAAGACGAGGAGAGTTTTATAACAGTAGTCCGTTTCACAGAAGATAACCCAGATGGAAAAGCAACTGCTCTTCTAAATTGGAGGCTATTGGTTGTTGAAGTATTGCCAGAAGAAGATGCAGTACTGATGCTTCTCCTTTGCCTTTCAATACTCAAAAGTGTATCAGAAATGAAGAAACAAGACGTGGGAGGCTTGTTGGTGAGGAGAAGATTAAAAGAAGCAAGGCTTGGAAGTAGGGATTGGGGTTCTGTGATACTTCATCCATCTTCATGGTCATCATCCATTGATTCAACTTATCTTCAACCCTGGCATTGGAATGCTGTGGTTGTCATGAAATCTGATGCTGTAGATCAGCTGAAAAGGTATCCAACATTAAGTCCATCACCAGTGGAAGCTTTCTCCTCCACTCCAAATGGCTCATGCGACACCACACCCTACCCAGCATTCTGCAAAACTACTCTGCCAGCTTCTCAATATTTATCCATACAAGACCAATGCCGTTTCTTCCCTCAGCAATCCTTATCAATCACAAAAACCATTTTCAATTTGGTCTCTTCTTATCTCAGAGACCCCTACACCATTCCTCATTCAACAGTGCACGCCCTTGAAGATTGTCTTAATCTTTCAGAACTTAACTCTGATTTCTTGTCCAATGTCCTCCAAGCCATTGAAAACACCCTGGCTAGCTATGAGGTCTATGACTTACAAACCTTGCTTAGTGCAATTTTAACTAACCAACAAACGTGCTTGGATGGTTTTAAAGAGGTAACACCCTATCCTATAGTTACCAATGCCTTATCAAGTCCTCTTTCTGATGCAATCAAACTATATAGCACATCTTTAGCCCTTTTCACCCGTGGTTGGGTTAGTGCAGCCACCACCACCACAGGAAGTTCAACCACGGTTGAGACTATTATTAATAGAAAGTTGCTGCAAACAAGCGTTGACGACAATGTGGTGGTGAACCCAGATGGGTCTGGGGATTTCGCCACCATAAATGATGCAATACATGCTGCACCTAACAATACCGGTACCAACAACGGGTACCATGTAATTTATGTTGTCGCTGGGATTTACAATGAGTACGTGTCTGTTCCTAAGAGCAAGCAGAACCTAATGCTCGTTGGAGATGGCATCAACCGCACTGTGCTCACTGGCAATCGCAGCGTGGTCGATGGCTGGACCACTTTCCAATCTGCCACTTTCGCTGTAGTTGGAAAAGGGTTTGTTGCAGTGAACATAACATTTCGCAACACTGCGGGATCCAGCAAGCATCAAGCAGTGGCTGTGAGAAACGGGGCAGACATGTCCACGTTCTACAATTGTAGTTTTGAAGGTTACCAAGATACACTGTATGTACATTCCCTAAGGCAATTCTACAAAAGCTGTGACATTTATGGAACAGTGGACTTCATATTTGGCAACGCAGCAGCACTACTCCAGGATTGTAACATGTATCCAAGACTTCCTATGCAAAACCAGTTCAATGCAATCACAGCACAAGGCAGAACAGATCCAAACCAAAACACTGGCATCTCCATACAAAACTGTTGCATAATAGCAGCCAGTGACTTGGGTGATGCTACCAACAATTATAATGGGATAAAGACATATTTGGGTCGGCCTTGGAAGGAGTATTCGAGGACTGTTTACATGCAATCTTTCATTGATGGCCTAATTGATCCAAAGGGGTGGAACGAATGGTCAGGGGATTTTGCTTTGAGCACGCTGTATTATGCAGAGTTTGCTAACTGGGGACCTGGTTCTAACACTAGCAATAGGGTCACATGGGAAGGTTACCATCTCATTGATGAAAAGGATGCAGATGATTTCACGGTGCACAAGTTTATTCAAGGTGAGAAATGGCTGCCTCAGACAGGAGTGCCTTTCAAAGCTGGGTTACAGTGA 3828 0.4459 MSENLDASEISPSTSSASLGETPEIAAIPLGIDLVSAARRNICFLRTVADSLWLHHTPIMVEAVRRYHDFWMPLIADLTLQNSSPPMILPPLDIHWVWFCHTLNPVSYREYCETRFSKLIGKAGIFDEENREYALMRCMEIWSSRYPLESFENEASWDSQDSDTVAVVGGSLKERVFKEVEKQRVLLCSMFVEPYRSEMVYLIAARQRYKAFLFMLQRFTREFSSRLVPTSDILLMWLTHQSYPTVYCEDLKALAIEGDLQKVATLSETVKEKESEETKKLWDRAFNQPYEKAGGEVPFMLDVVTSIKSPVYWEESGTDVNTKYRSMLPRFLLEACVFVRLKQRITTLQKDINHDFLHLRIVRCHSELKLDKALSKFTNDSWKKAWHFYCEFGTKGVMFEYRRHGGNCLRGSSLLDTVSFRWNDLLRADSLTLEKEVSQQVNVVTSITPPVQAPYLLKCVPDRVTDDSGAMISDVILKMNSYRPQEGRWLSRTVLDHAGRVCFVIRIRVGGGFWRRGGEAPSAVKWEDRIIEIREGSWSYVAGYIGRAPEKVVATATPKEPTEQCKAAWCFSTGDELTIQWESSQSVSGLTFSLLNQTSLESSVQLLRGRQMQYQVKKTKSKRKGEDMKIELEEKEIEGEEDEESFITVVRFTEDNPDGKATALLNWRLLVVEVLPEEDAVLMLLLCLSILKSVSEMKKQDVGGLLVRRRLKEARLGSRDWGSVILHPSSWSSSIDSTYLQPWHWNAVVVMKSDAVDQLKRYPTLSPSPVEAFSSTPNGSCDTTPYPAFCKTTLPASQYLSIQDQCRFFPQQSLSITKTIFNLVSSYLRDPYTIPHSTVHALEDCLNLSELNSDFLSNVLQAIENTLASYEVYDLQTLLSAILTNQQTCLDGFKEVTPYPIVTNALSSPLSDAIKLYSTSLALFTRGWVSAATTTTGSSTTVETIINRKLLQTSVDDNVVVNPDGSGDFATINDAIHAAPNNTGTNNGYHVIYVVAGIYNEYVSVPKSKQNLMLVGDGINRTVLTGNRSVVDGWTTFQSATFAVVGKGFVAVNITFRNTAGSSKHQAVAVRNGADMSTFYNCSFEGYQDTLYVHSLRQFYKSCDIYGTVDFIFGNAAALLQDCNMYPRLPMQNQFNAITAQGRTDPNQNTGISIQNCCIIAASDLGDATNNYNGIKTYLGRPWKEYSRTVYMQSFIDGLIDPKGWNEWSGDFALSTLYYAEFANWGPGSNTSNRVTWEGYHLIDEKDADDFTVHKFIQGEKWLPQTGVPFKAGLQ 1275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01487 1275 Pfam Plant invertase/pectin methylesterase inhibitor 779 923 IPR006501 GO:0004857
Gma10g01487 1275 CDD PMEI-like_3 780 928 - -
Gma10g01487 1275 ProSitePatterns Pectinesterase signature 2. 1105 1114 IPR033131 -
Gma10g01487 1275 SMART PMEI_2 772 923 IPR006501 GO:0004857
Gma10g01487 1275 Gene3D - 952 1274 IPR012334 -
Gma10g01487 1275 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED 770 1273 - -
Gma10g01487 1275 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 779 926 IPR035513 -
Gma10g01487 1275 TIGRFAM PME_inhib: pectinesterase inhibitor domain 779 923 IPR006501 GO:0004857
Gma10g01487 1275 Pfam Pectinesterase 958 1260 IPR000070 GO:0030599|GO:0042545
Gma10g01487 1275 Gene3D Invertase/pectin methylesterase inhibitor family protein 778 926 IPR035513 -
Gma10g01487 1275 SUPERFAMILY Pectin lyase-like 956 1273 IPR011050 -
Gma10g01487 1275 Pfam Glycine-rich domain-containing protein-like 30 109 IPR009836 -
Gma10g01487 1275 Pfam Glycine-rich domain-containing protein-like 107 250 IPR009836 -
Gma10g01487 1275 PANTHER PECTINESTERASE 770 1273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01487 Gma-Chr10 41981302 41989057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01487 781 1274 Carbohydrate Esterase AT4G02330 51.852 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01487 - - gmx:100809797 1518.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02196 19 50761104 50763663 Gma10g01487 10 41981302 41989057 PCT