Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma10g01487 | ATGTCGGAGAATCTCGACGCTTCCGAAATCTCGCCGAGCACTTCGTCCGCAAGTCTCGGCGAGACGCCGGAAATTGCCGCCATACCACTCGGAATCGATCTCGTGTCGGCGGCCAGGCGAAATATCTGCTTCTTGAGGACCGTGGCGGATTCTTTGTGGCTTCACCACACGCCCATTATGGTCGAAGCCGTAAGAAGGTACCATGATTTCTGGATGCCGTTGATTGCTGATCTCACGCTGCAAAACTCTTCCCCTCCCATGATTCTTCCTCCCCTTGACATCCACTGGGTTTGGTTCTGTCACACTTTAAACCCCGTGAGTTACAGGGAATACTGTGAAACGAGATTCTCGAAGCTGATTGGCAAAGCGGGAATCTTTGACGAAGAGAACAGAGAGTACGCGTTGATGCGGTGCATGGAGATTTGGAGCAGTAGATACCCGTTGGAGTCGTTTGAGAACGAGGCGAGTTGGGATTCGCAGGATTCGGATACTGTGGCTGTTGTTGGGGGGAGTTTGAAGGAGAGAGTGTTTAAGGAAGTTGAAAAGCAGAGGGTGTTGTTGTGTTCCATGTTTGTAGAACCGTACAGGTCCGAGATGGTGTACTTGATTGCAGCGAGACAGCGATACAAGGCTTTCTTGTTTATGCTGCAGAGGTTCACACGTGAGTTCTCTTCGCGCTTGGTTCCTACTTCGGACATTCTCTTAATGTGGCTGACCCATCAGAGCTACCCAACAGTGTATTGTGAAGATTTGAAAGCATTAGCTATAGAAGGTGATCTGCAGAAGGTGGCAACTCTGTCTGAAACGGTGAAGGAAAAGGAGTCTGAAGAAACCAAGAAGTTGTGGGATAGGGCGTTTAATCAACCTTATGAGAAAGCTGGTGGAGAGGTGCCTTTTATGTTGGACGTTGTTACCTCAATCAAATCCCCTGTCTATTGGGAGGAATCAGGCACAGATGTCAATACAAAATACAGGTCCATGCTTCCAAGATTTTTATTGGAGGCCTGTGTGTTTGTGAGGCTTAAGCAAAGAATAACAACATTGCAGAAGGATATAAACCATGATTTCCTACACCTCCGAATAGTAAGGTGTCATAGTGAACTAAAGCTAGATAAAGCCTTGTCCAAGTTCACCAATGATTCATGGAAAAAAGCTTGGCACTTTTACTGTGAGTTTGGGACTAAGGGAGTTATGTTTGAGTATCGTCGTCATGGTGGTAACTGCCTAAGAGGAAGTAGCCTGCTAGATACTGTTTCGTTCCGCTGGAATGATTTATTGAGAGCAGATTCTTTAACTTTGGAAAAGGAAGTTAGTCAACAGGTGAATGTTGTTACGTCAATAACCCCACCAGTTCAGGCACCATACTTGTTGAAATGTGTACCTGATCGAGTCACTGATGATTCTGGGGCTATGATATCTGATGTGATTCTGAAGATGAATAGTTATCGTCCACAAGAAGGGCGATGGTTGTCTCGCACAGTTCTTGATCATGCAGGGAGAGTGTGTTTTGTTATTAGAATTAGGGTAGGAGGAGGATTTTGGAGAAGAGGGGGTGAAGCTCCTTCAGCTGTAAAATGGGAAGATAGGATTATAGAGATACGGGAAGGATCTTGGTCTTATGTTGCTGGTTACATTGGTAGAGCACCTGAGAAGGTGGTGGCCACTGCAACACCAAAGGAACCTACTGAACAATGTAAAGCTGCATGGTGCTTTTCAACAGGAGATGAACTTACAATACAATGGGAGTCATCACAATCAGTGTCAGGTCTCACCTTTAGTTTGCTAAATCAAACATCTCTAGAGTCATCGGTACAGTTATTGAGAGGGAGGCAGATGCAATATCAAGTAAAGAAAACAAAGTCAAAGAGAAAAGGCGAAGACATGAAAATCGAGTTAGAGGAGAAAGAGATCGAGGGAGAAGAAGACGAGGAGAGTTTTATAACAGTAGTCCGTTTCACAGAAGATAACCCAGATGGAAAAGCAACTGCTCTTCTAAATTGGAGGCTATTGGTTGTTGAAGTATTGCCAGAAGAAGATGCAGTACTGATGCTTCTCCTTTGCCTTTCAATACTCAAAAGTGTATCAGAAATGAAGAAACAAGACGTGGGAGGCTTGTTGGTGAGGAGAAGATTAAAAGAAGCAAGGCTTGGAAGTAGGGATTGGGGTTCTGTGATACTTCATCCATCTTCATGGTCATCATCCATTGATTCAACTTATCTTCAACCCTGGCATTGGAATGCTGTGGTTGTCATGAAATCTGATGCTGTAGATCAGCTGAAAAGGTATCCAACATTAAGTCCATCACCAGTGGAAGCTTTCTCCTCCACTCCAAATGGCTCATGCGACACCACACCCTACCCAGCATTCTGCAAAACTACTCTGCCAGCTTCTCAATATTTATCCATACAAGACCAATGCCGTTTCTTCCCTCAGCAATCCTTATCAATCACAAAAACCATTTTCAATTTGGTCTCTTCTTATCTCAGAGACCCCTACACCATTCCTCATTCAACAGTGCACGCCCTTGAAGATTGTCTTAATCTTTCAGAACTTAACTCTGATTTCTTGTCCAATGTCCTCCAAGCCATTGAAAACACCCTGGCTAGCTATGAGGTCTATGACTTACAAACCTTGCTTAGTGCAATTTTAACTAACCAACAAACGTGCTTGGATGGTTTTAAAGAGGTAACACCCTATCCTATAGTTACCAATGCCTTATCAAGTCCTCTTTCTGATGCAATCAAACTATATAGCACATCTTTAGCCCTTTTCACCCGTGGTTGGGTTAGTGCAGCCACCACCACCACAGGAAGTTCAACCACGGTTGAGACTATTATTAATAGAAAGTTGCTGCAAACAAGCGTTGACGACAATGTGGTGGTGAACCCAGATGGGTCTGGGGATTTCGCCACCATAAATGATGCAATACATGCTGCACCTAACAATACCGGTACCAACAACGGGTACCATGTAATTTATGTTGTCGCTGGGATTTACAATGAGTACGTGTCTGTTCCTAAGAGCAAGCAGAACCTAATGCTCGTTGGAGATGGCATCAACCGCACTGTGCTCACTGGCAATCGCAGCGTGGTCGATGGCTGGACCACTTTCCAATCTGCCACTTTCGCTGTAGTTGGAAAAGGGTTTGTTGCAGTGAACATAACATTTCGCAACACTGCGGGATCCAGCAAGCATCAAGCAGTGGCTGTGAGAAACGGGGCAGACATGTCCACGTTCTACAATTGTAGTTTTGAAGGTTACCAAGATACACTGTATGTACATTCCCTAAGGCAATTCTACAAAAGCTGTGACATTTATGGAACAGTGGACTTCATATTTGGCAACGCAGCAGCACTACTCCAGGATTGTAACATGTATCCAAGACTTCCTATGCAAAACCAGTTCAATGCAATCACAGCACAAGGCAGAACAGATCCAAACCAAAACACTGGCATCTCCATACAAAACTGTTGCATAATAGCAGCCAGTGACTTGGGTGATGCTACCAACAATTATAATGGGATAAAGACATATTTGGGTCGGCCTTGGAAGGAGTATTCGAGGACTGTTTACATGCAATCTTTCATTGATGGCCTAATTGATCCAAAGGGGTGGAACGAATGGTCAGGGGATTTTGCTTTGAGCACGCTGTATTATGCAGAGTTTGCTAACTGGGGACCTGGTTCTAACACTAGCAATAGGGTCACATGGGAAGGTTACCATCTCATTGATGAAAAGGATGCAGATGATTTCACGGTGCACAAGTTTATTCAAGGTGAGAAATGGCTGCCTCAGACAGGAGTGCCTTTCAAAGCTGGGTTACAGTGA | 3828 | 0.4459 | MSENLDASEISPSTSSASLGETPEIAAIPLGIDLVSAARRNICFLRTVADSLWLHHTPIMVEAVRRYHDFWMPLIADLTLQNSSPPMILPPLDIHWVWFCHTLNPVSYREYCETRFSKLIGKAGIFDEENREYALMRCMEIWSSRYPLESFENEASWDSQDSDTVAVVGGSLKERVFKEVEKQRVLLCSMFVEPYRSEMVYLIAARQRYKAFLFMLQRFTREFSSRLVPTSDILLMWLTHQSYPTVYCEDLKALAIEGDLQKVATLSETVKEKESEETKKLWDRAFNQPYEKAGGEVPFMLDVVTSIKSPVYWEESGTDVNTKYRSMLPRFLLEACVFVRLKQRITTLQKDINHDFLHLRIVRCHSELKLDKALSKFTNDSWKKAWHFYCEFGTKGVMFEYRRHGGNCLRGSSLLDTVSFRWNDLLRADSLTLEKEVSQQVNVVTSITPPVQAPYLLKCVPDRVTDDSGAMISDVILKMNSYRPQEGRWLSRTVLDHAGRVCFVIRIRVGGGFWRRGGEAPSAVKWEDRIIEIREGSWSYVAGYIGRAPEKVVATATPKEPTEQCKAAWCFSTGDELTIQWESSQSVSGLTFSLLNQTSLESSVQLLRGRQMQYQVKKTKSKRKGEDMKIELEEKEIEGEEDEESFITVVRFTEDNPDGKATALLNWRLLVVEVLPEEDAVLMLLLCLSILKSVSEMKKQDVGGLLVRRRLKEARLGSRDWGSVILHPSSWSSSIDSTYLQPWHWNAVVVMKSDAVDQLKRYPTLSPSPVEAFSSTPNGSCDTTPYPAFCKTTLPASQYLSIQDQCRFFPQQSLSITKTIFNLVSSYLRDPYTIPHSTVHALEDCLNLSELNSDFLSNVLQAIENTLASYEVYDLQTLLSAILTNQQTCLDGFKEVTPYPIVTNALSSPLSDAIKLYSTSLALFTRGWVSAATTTTGSSTTVETIINRKLLQTSVDDNVVVNPDGSGDFATINDAIHAAPNNTGTNNGYHVIYVVAGIYNEYVSVPKSKQNLMLVGDGINRTVLTGNRSVVDGWTTFQSATFAVVGKGFVAVNITFRNTAGSSKHQAVAVRNGADMSTFYNCSFEGYQDTLYVHSLRQFYKSCDIYGTVDFIFGNAAALLQDCNMYPRLPMQNQFNAITAQGRTDPNQNTGISIQNCCIIAASDLGDATNNYNGIKTYLGRPWKEYSRTVYMQSFIDGLIDPKGWNEWSGDFALSTLYYAEFANWGPGSNTSNRVTWEGYHLIDEKDADDFTVHKFIQGEKWLPQTGVPFKAGLQ | 1275 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma10g01487 | 1275 | Pfam | Plant invertase/pectin methylesterase inhibitor | 779 | 923 | IPR006501 | GO:0004857 | |
| Gma10g01487 | 1275 | CDD | PMEI-like_3 | 780 | 928 | - | - | |
| Gma10g01487 | 1275 | ProSitePatterns | Pectinesterase signature 2. | 1105 | 1114 | IPR033131 | - | |
| Gma10g01487 | 1275 | SMART | PMEI_2 | 772 | 923 | IPR006501 | GO:0004857 | |
| Gma10g01487 | 1275 | Gene3D | - | 952 | 1274 | IPR012334 | - | |
| Gma10g01487 | 1275 | PANTHER | PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED | 770 | 1273 | - | - | |
| Gma10g01487 | 1275 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 779 | 926 | IPR035513 | - | |
| Gma10g01487 | 1275 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 779 | 923 | IPR006501 | GO:0004857 | |
| Gma10g01487 | 1275 | Pfam | Pectinesterase | 958 | 1260 | IPR000070 | GO:0030599|GO:0042545 | |
| Gma10g01487 | 1275 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 778 | 926 | IPR035513 | - |
Showing 1 to 10 of 14 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma10g01487 | - | - | gmx:100809797 | 1518.06 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma19g02196 | 19 | 50761104 | 50763663 | Gma10g01487 | 10 | 41981302 | 41989057 | PCT |
Showing 1 to 1 of 1 entries