Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01478 ATGAGCAGAACTGAATTATCTAATATGAAGCAACCTCCTGTTCCCCTGGCAACCCTGATTGGCCAGGAGTTACGGAATGGAAAAATCGAAAAGCCTTTTGTGAAGTATGGGCAGGCTGGCCTGGCAAAGAAAGGAGAAGATTACTTTTTAATCAAAGCAGATTGCCAGAGAGTTCCAGGGGATTCATCAACACTGTTTTCTGTCTTTGCGatctttgatgggcacaatggtatatctgctgctatttttgcgaaggaaagcatactaagtaatgttttgagtgcaataccacaagatatcagtagggatgagtggcttcaagctctgcctcgtgctctagttgttggttttgtaaaaactgacatagagtttcagaaaaaaggtACATTCAGAGTTTTCTTGGCATCCCTATTGGAGTTCTCCACATGCACTTTTCTTGACCTTATAATTTTGCCTGCAGGGGAAACTTCAGGAACAACAGCTACATTTGTTCTGGTTGATGGATGGACTGTTACTGTTGCATCTGTTGGGGATTCCCGTTGCATATTAGATACTCAAGGAGGTGTTGTTTCTCTCTTGACAGTTGATCACAGATTGGAAGAAAATGCAGAAGAGAGGGAACGCGTTACTGCCAGTGGTGGTGAAGTAGGAAGACTCAATGTATTTGGAGGCAATGAGGTAGGGCCTCTTCGCTGTTGGCCTGGTGGATTGTGCCTTTCTAGATCAATTGGTGACACAGACGTGGGAGAATTTATTGTCCCAATACCACATGTCAAGCAAGTGAAGCTATCAAATGCTGGTGGAAGACTTATTATAGCTTCTGATGGTATTTGGGATGCTTTATCTTCTGATATGGCTGCCAAGTCATGCCGGGGTGTACCTGCAGAGCTTGCTGCAAAGCTGGTGGTTAAGGAAGCTCTAAGGTCAAGAGGGCTGAAGGATGATACAACTTGCCTTGTTGTAGATATTATTCCTTCAGATCATCCTATGTTACCAGCAATTCCAAGAAAGAAACGTAGTGTGCTAACTTCCCTTCTCTTTGGAAAGAAATCTCCAAACTCTACAAACAAAGGCAACAATAAGCTTTCTGCTGTTGGTGTTGTGGAGGAATTATTTGAAGAGGGTTCTGCAATGCTTACAGAGAGGTTAGGCAAGGATTTTCCGTCTAATTCGAATCCTGGGATTTTCCGCTGTGCAGTTTGCCAAGCAGATCAGCCCTCTGTGGATAGTGTATCAATGAACACTGGGTCTTTTTTTCCCCCAGTATCTAAGCCATGGGAAGGTCTGTTCCTCTGCACAAACTGTCAGAAGAAGAAAGATGCCATGGAAGGAAAAAGGTCTACCAGGCCCTCAGAGACAGCATAA 1365 0.3868 MSRTELSNMKQPPVPLATLIGQELRNGKIEKPFVKYGQAGLAKKGEDYFLIKADCQRVPGDSSTLFSVFAIFDGHNGISAAIFAKESILSNVLSAIPQDISRDEWLQALPRALVVGFVKTDIEFQKKGTFRVFLASLLEFSTCTFLDLIILPAGETSGTTATFVLVDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGVPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPMLPAIPRKKRSVLTSLLFGKKSPNSTNKGNNKLSAVGVVEELFEEGSAMLTERLGKDFPSNSNPGIFRCAVCQADQPSVDSVSMNTGSFFPPVSKPWEGLFLCTNCQKKKDAMEGKRSTRPSETA 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01478 454 Gene3D - 33 327 IPR036457 -
Gma10g01478 454 ProSiteProfiles PPM-type phosphatase domain profile. 25 323 IPR001932 -
Gma10g01478 454 SMART PP2C_SIG_2 51 323 IPR001932 -
Gma10g01478 454 CDD PP2Cc 43 323 IPR001932 -
Gma10g01478 454 SUPERFAMILY PP2C-like 38 323 IPR036457 -
Gma10g01478 454 PANTHER ALPHABET, ISOFORM E-RELATED 2 452 - -
Gma10g01478 454 Pfam Protein phosphatase 2C 62 307 IPR001932 -
Gma10g01478 454 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 452 - -
Gma10g01478 454 SMART PP2C_4 23 321 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01478 Gma-Chr10 41912769 41914891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01478 1 453 PP2C-type Phosphatase Gene Family AT1G09160 70.640 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01478 - - gmx:100791944 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01478 10 41912769 41914891 Gma10g01478 10 41912769 41914891 ECH