Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01477 ATGGCGCCAGAGCTTGCCTTGCCATTCTCTGTTGTATCTGTGGTCGAAGATGTTCTTCAAAAGCATGGAAGTCCTTTAATCGACATTGACTTGGCATCAAGGAAGGCTGAAGAAGCTTCCTTAAGAAGGAACGAAGCGGCCGCGTGGCTGCAAAAGACAGTTGGAGGGAAAGACATGCCAGGTGAGCCTACTGAAGAACATTTCAGGATTGCGTTGCGTAGTGGCATTGTCCTTTGCAATGCTCTTAACAATATTCAACCCGGAGCAGTGCCTAAGGTAGTCGAAGCCCCCAACGACAGTGTTATTATTCCTGATGGGGCAGCTCTGTCTGCTTATCAATGCTTTGAAAATGTAAGGAATTTTCTAGTAACTGTGGAGGAAATGGGGCTTCCCACATTTGAAGTTTCTGATTTGGAACAGGGAGGGAAATCTTCGAGGATAGTGAATTGTGTTTTAGCACTTAAGTCTTACAGTGAATGGAAAATGGGAGGAAAAATTGGATCATGGAAATATGGTGGGAATCCAAAGCCACCTGCTCCCTCTGCAAAACCTATTATGTGGAAAAGCTCAGAACCATTCATGAGGTCTTTGTCAAGGGGTTTTTGGTTAGGCGATAGAGATGGTTTGCCGAGTGATAATTCTCCAAGCAGTGTTCTCAGTGAAGAGGGTTCTATTCCCTCCTTGAATTCACTAGTTCGCGAAATTTTATGTAATAAGAAGCAAGAAGAGATTCCCATTGTGGTGGAGTCTCTACTTAGCAATGTCATGGAGGAGTTTGAACAACGCTTGCTAATCCAACAAGAAACATTCAAAACAACTCAAGAAGATAAGGCACCACCTGAAGCAGAGGATTCTAATGTGGAAGCTGCTTGTGATGATGAAGAGCACAATGGCGACGAAGAATCAATTGACCAGCCTTTGAAGCAGCAAAAGTTATTTCAGCAGCAAAATGAAAACGTTCAGGAATTGAAAATGATGGTTCATCAAACAAAAACAGGAATTCAGGTTCTGCAACATAAATACGAGGAGGATATCATCTATCTAAGTACGTATACTGCTTTGAAAAATCCAACATTTTTAACAAAATTATTCTATATTCTAGCTAATTACTGCATACCCATAATAGGTAAGCACCTGCTTGGCCTAGCTTCTGCGGCTTCAGGATATCAGAAAATTTTTGAAGAAAACCGCAAGTTATATAATCAATTGCAAGACCTGAAAGGAAATATTAGGGTGTACTGCAGAGTTCGACCCTCAACAAGTGGTCAAACAAACCATCATTGCCCTATCAATAACATAGATGGAGGAAGTATGTCACTAATAATTCCTTCCAAAAATGGGAAAGATGGGAAGAAGACATTTAATTTCAACAAAGTGTTTGGTCCTTCTTCTACCCAAGGGGAGGTTTTCTCTGATACACAACCACTGATTCGTTCGGTTCTTGACGGCTACAATGTGTGTATATTTGCTTATGGCCAGACAGGATCAGGAAAAACACACACTATGTCTGGACCAGACAATTATACTGAGGAAACAGTAGGTGTCAACTACCGCGCACTGAGAGATCTTTTCTTTCTCTCAGAGCAGAGGAAAGACATCATTCACTATGATATATCTGTTCAGATGCTAGAGATTTACAATGAACAAGTCAGAGACCTATTAACCACAGACAAAATTCGCAACAGTTCCCATAATGGCATTAACGTGCCAGATGCAAACCTGGTTCCTGTTTCATCAACTTCCGATGTCTTGAATTTAATGAACTTGGGACAAAAGAATCGGGCAGTTAGTGCTACTGCCATGAATGATCGGAGTAGTCGTTCTCATAGCTGCTTGACAGTTCATGTTCAAGGAAGAGAGCTTGCATCAGGGAATAGTCTTCGTGGTTGTATCCACTTAGTTGACTTGGCAGGAAGTGAAAGGGTTGATAAATCTGAGGTCACAGGAGATAGGCTGAAGGAGGCTCAACATATTAACAAGTCACTTTCTGCTTTAGGAGATGTGATTGCTTCCCTTGCCCAAAAGCAATCACACGTTCCCTATAGGAACAGTAAACTTACTCAGCTGCTTCAAGATTCTCTTGGAGGCCAAGCAAAGACACTCATGTTTGTTCATGTTAGTCCGGATGCAGAAGCCATTGGAGAAACAATTAGCACATTGAAGTTTGCTGAAAGGGTCTCCACTGTTGAACTTGGTGCTGCACGAGTTAACAAAGATAGTTCAGAGGTCAAAGAGCTCAAAGAACAGATCGCTAGTCTGAAGGCAGCCTCAGCCAGGAAAGATGGAGAATTGGAACACTTTCAACAGTATGCAAATAGCATTACTGAAACACCAAAGTTCAAACCTGATTTGACTTCCTTTGCACGGTCACCTAGTTGGTCGCATGGACCTCCTAGGCCACCAAGCAGAGATGATCCTAGTAGCATGGAGGACAAGAAAAAGCCTACACCCAAGTTCATGAAAAGGCGAAGCTTTGATCCCAGGGACATTTGTAGGAAATCACCCCGTTGGCCACATCATGAAAGGGTAAATGGAAAGGAGGATGATAAAGAATCGATTTCTGGGGATTGTGTGAGTAAGAGTACAAAAAAGAATGACCACATTTTAACTACTGATGATAGCCTCGTAGGACGACAGTGTGAAACAGAAAGCAAACGTTCATCTTCTGATTCTTCTCCAATGCTAAGTCCCACAATTCTTTTAGACGTCCCTTCAAAAATATGCATGGAGGTGGCCACCACAAAATCAAATGACTCTGATGAGCTTGAGTTAGCAACTAGTGAAAGTTCAGAATCAGACAAGAGTTGGCAATCACATGATTCACATGCACGTGCACCTAAAGCAACCTCTTTTCCCAACGGATTAGTGTCTAAAACAAGAAAATCAACTCTTAGACGACAAGCAGAAAACCAAGAAACCAGGAGTATGATCCCTTCAATGTCTCCTACATCAACAAGGAGACAAACCACCGTAGTTAGTCAGCTAAGAAAGCATCCAGATGCAAAGAGAAGTGGAAATGCCAAATGA 3027 0.4212 MAPELALPFSVVSVVEDVLQKHGSPLIDIDLASRKAEEASLRRNEAAAWLQKTVGGKDMPGEPTEEHFRIALRSGIVLCNALNNIQPGAVPKVVEAPNDSVIIPDGAALSAYQCFENVRNFLVTVEEMGLPTFEVSDLEQGGKSSRIVNCVLALKSYSEWKMGGKIGSWKYGGNPKPPAPSAKPIMWKSSEPFMRSLSRGFWLGDRDGLPSDNSPSSVLSEEGSIPSLNSLVREILCNKKQEEIPIVVESLLSNVMEEFEQRLLIQQETFKTTQEDKAPPEAEDSNVEAACDDEEHNGDEESIDQPLKQQKLFQQQNENVQELKMMVHQTKTGIQVLQHKYEEDIIYLSTYTALKNPTFLTKLFYILANYCIPIIGKHLLGLASAASGYQKIFEENRKLYNQLQDLKGNIRVYCRVRPSTSGQTNHHCPINNIDGGSMSLIIPSKNGKDGKKTFNFNKVFGPSSTQGEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPDNYTEETVGVNYRALRDLFFLSEQRKDIIHYDISVQMLEIYNEQVRDLLTTDKIRNSSHNGINVPDANLVPVSSTSDVLNLMNLGQKNRAVSATAMNDRSSRSHSCLTVHVQGRELASGNSLRGCIHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVIASLAQKQSHVPYRNSKLTQLLQDSLGGQAKTLMFVHVSPDAEAIGETISTLKFAERVSTVELGAARVNKDSSEVKELKEQIASLKAASARKDGELEHFQQYANSITETPKFKPDLTSFARSPSWSHGPPRPPSRDDPSSMEDKKKPTPKFMKRRSFDPRDICRKSPRWPHHERVNGKEDDKESISGDCVSKSTKKNDHILTTDDSLVGRQCETESKRSSSDSSPMLSPTILLDVPSKICMEVATTKSNDSDELELATSESSESDKSWQSHDSHARAPKATSFPNGLVSKTRKSTLRRQAENQETRSMIPSMSPTSTRRQTTVVSQLRKHPDAKRSGNAK 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01477 1008 Coils Coil 736 763 - -
Gma10g01477 1008 SMART ch_5 42 157 IPR001715 GO:0005515
Gma10g01477 1008 MobiDBLite consensus disorder prediction 286 300 - -
Gma10g01477 1008 ProSiteProfiles Kinesin motor domain profile. 409 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g01477 1008 CDD KISc_C_terminal 407 731 - -
Gma10g01477 1008 MobiDBLite consensus disorder prediction 969 995 - -
Gma10g01477 1008 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 409 766 IPR027417 -
Gma10g01477 1008 Pfam Calponin homology (CH) domain 42 159 IPR001715 GO:0005515
Gma10g01477 1008 Pfam Kinesin motor domain 415 728 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g01477 1008 ProSiteProfiles Calponin homology (CH) domain profile. 40 159 IPR001715 GO:0005515
Gma10g01477 1008 SMART kinesin_4 407 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g01477 1008 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 350 - -
Gma10g01477 1008 Coils Coil 389 409 - -
Gma10g01477 1008 PANTHER KINESIN-LIKE PROTEIN KIN-14H 375 997 - -
Gma10g01477 1008 MobiDBLite consensus disorder prediction 912 1008 - -
Gma10g01477 1008 MobiDBLite consensus disorder prediction 271 304 - -
Gma10g01477 1008 PANTHER KINESIN-LIKE PROTEIN KLP-3 375 997 - -
Gma10g01477 1008 PANTHER KINESIN-LIKE PROTEIN KIN-14H 6 350 - -
Gma10g01477 1008 PRINTS Kinesin heavy chain signature 599 616 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g01477 1008 PRINTS Kinesin heavy chain signature 630 648 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g01477 1008 PRINTS Kinesin heavy chain signature 483 504 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g01477 1008 PRINTS Kinesin heavy chain signature 679 700 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g01477 1008 SUPERFAMILY Calponin-homology domain, CH-domain 42 172 IPR036872 -
Gma10g01477 1008 Gene3D - 26 171 IPR036872 -
Gma10g01477 1008 MobiDBLite consensus disorder prediction 774 899 - -
Gma10g01477 1008 Gene3D Kinesin motor domain 404 770 IPR036961 -
Gma10g01477 1008 MobiDBLite consensus disorder prediction 804 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01477 Gma-Chr10 41893917 41899941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01477 397 763 Calmodulin-binding Proteins AT5G65930 39.572 4.27e-73 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01477 K10406 - gmx:100808197 1873.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01477 10 41893917 41899941 Gma10g01477 10 41893917 41899941 ECH