Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01471 ATGGAATCAAATAGGCAATCTCTCGAGGGACATGAGGGTGCTGATGGTAGAGGTCATAGAATTTCAGTTATGCAGTCTACACAGAAACATGGTGATCCAAAACAACCATCTCTTAGTGGCCTTAGAAATGTGATGAAAGGACTGTGCACTAATGACTGTGAGTTGCACTTTGAACGTTTCCTCCGAAGAGTGGTACGAGAGGAGGTAGAATGCAAAATCCAGGATTTCCTATCATCAAGGGGATGGGTTAATCAAATTAGCACATCTAGAGCAACACCCTTTGAGTTACGCTTCGTTACTAGAACGCCTGATATAATTTTTACGAACTCTAACGTGATATCAGAGGATAAAACATCCATTCAAATTGCTCTCTTTGATGTTAGAGATCAGTCAGTGGTTAATGTTGGTCCCCTCTCCTCTCTAAAGGTAGAGATCTGTGCCCTCAACGGTGAGTTCGGTTCCAACGGAAGTGAGGATTGGACTGAAGGTGAATTCAATGCCAATATCTTGCGTGAGAGAGATGGTAGAAGGCCATTATTGAATGGAGATAGGTTTATTACTCTGAAAAATGGAGTAGGTTGTGTCAATAAACTTGTGTTCACAGATAATTCGAGATGGATTAGAAGCAGAAAGTTTAGGTTGGGAGCCAAAGTTGTGCCACCAATTTCTATTGAAGCCAACATTAAGGAAGGTAGAAGCGAACCTTTTGTGGTCAAAGATTACAGAGGAGAGGCTTACAAGAAACACCACCCTCCTTCCTTGAATGATGATGTTTGGCGTTTAGAGCAAATTGCCAAAGATGGAAAAATCCACGATCGGCTATCTCTCCATGGAATTCACACCGTTCAGGATCTCTTGCGGTTATACACAACAAACCCTTCTTCATTACTTGAGAAGGTTGGCAACATTACGAAGAGGTCATGGATAACAATTATTGAACATGCCAAGACTTGTGCGATAGATGATGACGAGACTTTTGTCTACCACACAGCAGAACAATCGATAGGTCTACTTTTCAATTCCATTTACATCCTTGTAGGTGTGACATTCGATGGCCAAAATTACCTCTCGCCTGATATTCTCAACCCCAACGAGAAGCATTTGGTGGAAACATTGAAGCAACATGCTTACAAAAATACGGATAATTTCAAATCAATTCATGAGACATCATTGAGCTGCTCAAAACCATTGACATTTCTAGGAGTAGGGCAATCTGATGCTACAGAGCAAAGTCTGCAACGGTTCAATATCTCTACAGAACAAGAAGGTCATCAAGGAACATGGGTTGGTAATGGTCAACCATATGCCTCAACTTCATATACAGATGAAAGCGTACATAGTTACCAAATCTATGCTGATCCAGTGCCAGACATAACAGACATGCCACTGAACAATCCTTATGGTAGCAATTCAATGAAGGATTTTTTCTCTGGATTGTGCATTGAAGGGGATAGTTGGGTCCCTTATGGATAA 1473 0.4128 MESNRQSLEGHEGADGRGHRISVMQSTQKHGDPKQPSLSGLRNVMKGLCTNDCELHFERFLRRVVREEVECKIQDFLSSRGWVNQISTSRATPFELRFVTRTPDIIFTNSNVISEDKTSIQIALFDVRDQSVVNVGPLSSLKVEICALNGEFGSNGSEDWTEGEFNANILRERDGRRPLLNGDRFITLKNGVGCVNKLVFTDNSRWIRSRKFRLGAKVVPPISIEANIKEGRSEPFVVKDYRGEAYKKHHPPSLNDDVWRLEQIAKDGKIHDRLSLHGIHTVQDLLRLYTTNPSSLLEKVGNITKRSWITIIEHAKTCAIDDDETFVYHTAEQSIGLLFNSIYILVGVTFDGQNYLSPDILNPNEKHLVETLKQHAYKNTDNFKSIHETSLSCSKPLTFLGVGQSDATEQSLQRFNISTEQEGHQGTWVGNGQPYASTSYTDESVHSYQIYADPVPDITDMPLNNPYGSNSMKDFFSGLCIEGDSWVPYG 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01471 490 PANTHER CALMODULIN-BINDING PROTEIN 1 487 - -
Gma10g01471 490 Pfam Calmodulin binding protein-like N-terminal domain 95 240 IPR046831 -
Gma10g01471 490 Pfam Calmodulin binding protein central domain 253 318 IPR046830 -
Gma10g01471 490 Pfam Calmodulin binding protein C-terminal domain 325 385 IPR046829 -
Gma10g01471 490 PANTHER OS02G0177800 PROTEIN 1 487 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01471 Gma-Chr10 41813898 41817114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01471 41 391 Calmodulin-binding Proteins AT5G26920 40.782 1.67e-83 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01471 - - gmx:100806598 983.786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01471 10 41813898 41817114 Gma10g01471 10 41813898 41817114 ECH