Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01466 ATGGAGATCCAGAAAAAAGGTTTCAAGGGAAGCTTCCTTAGCTTCTTTGACTGGAATGGCAAATCTCAAAAGAAGCTGCTTTGTGACAGGCCTATCTTACCTGATGTTTCAAAGCAAGGAAAGGAAAACATGGACAGCATGCCAAAGTCACAGGAAAATAGGATAAAAATGGATGACAATGGAGTAAATCCTAGCAATAATGCAAGTTGTGGTTTTGATTGTGCCATATCAATTAATAGTGATGAAGGGTATGGGACTAAAGCCCCAGGGTTAGTAGCCAGACTTATGGGTTTGGATTCGTTGCCAGTTTTAACTGTCTCTGAGCTCTCCTCATCATCCACTTCATTATATGGCTCCAACTCTCTTGGATCTTCTCATTCTCATGATGAGGATGTTCTTCACTCAATGGTTGACTATGGTTGCCCTGTGGATCCCATAAATATGCGACTTAAGCCGGAGAAGTCTTCTTGGGGTGCCATGCAATCAAGGGCTTTGAAAGTGGGAAATCCGTCAATGAAGAGATTTCAGACTGAAATGTTGCCTCCAAAGTCTGCTAAACCCATTCCAGTTTCTCACAACAAACTTTTGTCTCCTATCAAGAGCCCTGCTTTTATGCAACCTAAGCATGCAGCTCATATAATGGAGGCAGCTACCAAAATAATTGAGGCAAGTCCCCAGCCATGTAGGAGGAATAAAATGTCTTCATATGGACCTTCATCTGTTTCATTAAGAATTCTTGATCTGAAAGAGAAATTGGAAGCTGCACAATATGAATCCAAGTTCATGGATACACACACTGCTAACCCTCTGAATGGCAAGCCTAGTGAGAGGAGAAACAATTTATATAAATCCACTTTAAGTTTCAAAGGTTCAAGGCATTCAGTAAAGAACAGTTCTTGTCAGTTGGCAAGCAAAGGAAAATCTGCTTCACTTGCAATGCCATCTAAAACCAATGCTCAGAGCCGTGATGAATTGACTTTGAATGGGAATAGGAGATATATGAGGCAGAAAGAACATAACAATATAAAATCAAACCAGTTGCCCAGGAGCCAGAAGAAACAAATTGCAGACAGGGGCAGGGTAATGCAGCAGAGAGCTTGTACAAGCCAGAATAGAAATGTGCTTGGAAAGAATAATCAAAAGCAGAATAGTGTAACCAACAAAGGTAGTTCAGCTTCAAAGATGGACTCTAATAAGCCAACACAAACTTGGTCTTCAGAAAGTTCTACTGGAGCAAAGAAGACTAAAAAAAAGGTTTCTGTAAATGCCAACATTGAGCCCAAAAGGTTTGGCACAAGGATCACTGATACCATAAAGGAGTTTCCAGTTTCCAAAAGGAAGGGTATTTCCCAAAAGAAAAACTATAGCAGTTGCGATATTCACAATAAGCCAAGAGGTTCTGATAGTGCAGCTAATACTTATGAAAACATGCCCATAAAATGCAATATTACGACTGATGGAAGTATTGACCAGGATGCATTTAGCATGAAAGGAAGCAATGGTGTGATTTCATTTACATTTACATCTCCCTTGAGAAGAAACTTGCCCGAGTTACAGTCCTCTAGCGAGCAAGCGATGGGAACAAGGAACAAAATTGATGTCAATTCTTGTAGTAGTAATGACAAGTTTTATCCTCAAAAGTCATCATTTTCTCCTCCCAGGTTACATGTAATAGATGGTGATGCTTTAAGTGTTCTTTTGGAGAAAAAACTGCAAGAATTGACATCTAGAATTAACCCACCTCAGTGCTCCCTCACGACAGAAGGGTCTTCTACTGGTTTAAGATCTAGTTTGGAAGACAAATTTCGAAGTGTGTTAAGCACCACAGTAAGGGAACAAGACATAAGCTTTTACAATCAATTGGACAGCGTGCATGACAATTGTTCTTCAAGTGATATTGTGGTGCTTAGCATGAATCAGCAACTGCAGACATCAGAATCAATGGAAGAGCCTAGCTGTCGCAGCAACAGTGAAAGCAAAAATGGAAGTTACTTAGATAGTGCATATGGCATTACAGTTTATTCTTCCATGCAAGATGAAGAGGTATCTAATTTTTCTCTAATGAATGAATCTATGTCACTCGAAAACGAGGCAGAATGGTCTGAGCAAAGCTCTTCCATAGTGATGGGGGATAACATGGCCAGTGAACAATCAAGTGTAATGTCAAATTCGGCCGAATTTACAAGATCAGCGAGGAACATGGAACTTGAATATGTAAAGGATATATTCAGCAATGCAGAGTTGATGACAGAAGAATTTGTGGTGGGTGAGACAGACAAGATCATAATGCCAAATCTCTTTGACAAGTTGGAGAATAAAGGCCTTGGGGCAGAAAACTATGAAGAGTACTCTAAGATTGAGAGGAGGGCTATATTTGACACTGTGAGTGAGTGCCTAGAACTAAGGTGCAGACAAATTTTTGTTGGAAGCTGCAAAGCATGGCCAAAATGGTTGGCTTCAGTTCAGAGGAAGAACTGTTTAGCAGAAGAGTTTTACAAGGAAATACTGAGCTTTAGAAGTATGGAAGAAGAGGTAGAGGTGGATGAACTTGTCAACAAGGACATGAGCACTGGATGGTGTAAATGGCTTGACTTTGAAATTGAAGCCTTTGAGAAGGGTTCAGAACTTGAATTTGATATCCTAACATGTTTGATTAACGAATTGGTTTCTGATTTATTGCATGTTTAA 2688 0.3992 MEIQKKGFKGSFLSFFDWNGKSQKKLLCDRPILPDVSKQGKENMDSMPKSQENRIKMDDNGVNPSNNASCGFDCAISINSDEGYGTKAPGLVARLMGLDSLPVLTVSELSSSSTSLYGSNSLGSSHSHDEDVLHSMVDYGCPVDPINMRLKPEKSSWGAMQSRALKVGNPSMKRFQTEMLPPKSAKPIPVSHNKLLSPIKSPAFMQPKHAAHIMEAATKIIEASPQPCRRNKMSSYGPSSVSLRILDLKEKLEAAQYESKFMDTHTANPLNGKPSERRNNLYKSTLSFKGSRHSVKNSSCQLASKGKSASLAMPSKTNAQSRDELTLNGNRRYMRQKEHNNIKSNQLPRSQKKQIADRGRVMQQRACTSQNRNVLGKNNQKQNSVTNKGSSASKMDSNKPTQTWSSESSTGAKKTKKKVSVNANIEPKRFGTRITDTIKEFPVSKRKGISQKKNYSSCDIHNKPRGSDSAANTYENMPIKCNITTDGSIDQDAFSMKGSNGVISFTFTSPLRRNLPELQSSSEQAMGTRNKIDVNSCSSNDKFYPQKSSFSPPRLHVIDGDALSVLLEKKLQELTSRINPPQCSLTTEGSSTGLRSSLEDKFRSVLSTTVREQDISFYNQLDSVHDNCSSSDIVVLSMNQQLQTSESMEEPSCRSNSESKNGSYLDSAYGITVYSSMQDEEVSNFSLMNESMSLENEAEWSEQSSSIVMGDNMASEQSSVMSNSAEFTRSARNMELEYVKDIFSNAELMTEEFVVGETDKIIMPNLFDKLENKGLGAENYEEYSKIERRAIFDTVSECLELRCRQIFVGSCKAWPKWLASVQRKNCLAEEFYKEILSFRSMEEEVEVDELVNKDMSTGWCKWLDFEIEAFEKGSELEFDILTCLINELVSDLLHV 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01466 895 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 895 - -
Gma10g01466 895 Pfam Domain of unknown function (DUF4378) 735 887 IPR025486 -
Gma10g01466 895 PANTHER DUF4378 DOMAIN PROTEIN 1 895 - -
Gma10g01466 895 MobiDBLite consensus disorder prediction 288 420 - -
Gma10g01466 895 MobiDBLite consensus disorder prediction 288 327 - -
Gma10g01466 895 MobiDBLite consensus disorder prediction 363 410 - -
Gma10g01466 895 Pfam DUF761-associated sequence motif 80 102 IPR032795 -
Gma10g01466 895 MobiDBLite consensus disorder prediction 641 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01466 Gma-Chr10 41751406 41755314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01466 3 893 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 32.441 3.99e-98 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01466 - - gmx:102665160 1743.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01466 10 41751406 41755314 Gma20g02230 20 49421961 49425891 ECH
Gma10g01466 10 41751406 41755314 Gma10g01466 10 41751406 41755314 ECH
Gma10g01466 10 41751406 41755314 Gma20g02230 20 49421961 49425891 GST
Gma03g02142 03 46891768 46895980 Gma10g01466 10 41751406 41755314 PCT
Gma10g01466 10 41751406 41755314 Gma03g02142 03 46891768 46895980 PCT