Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01447 ATGAAGCTACTTCCTCGAGAAATAATTTTCTCTCTTATTTTGTTCATTATCTGTTCTTCTAAGGTTTGTAAAGCAATGGATTGTGGTGGCACACAAGTTTCACGTACCATCGTAGTCGATCAATCTGGCAAATCAGATTTTCATACCATTCAAGCTGCCATTGATTCAATAAAGACAAGCAACAATAAATGGGTGAAAATTCACATAAAGGCTGGCACATATACAGAGCAGATTCAAATTCCATATAACATGCCGTGCATCTTTTTGGAAGGCCAAGGAAAAGAAGTCACCACTGTTACATACAATGACCACCAAAAAACAGATATTAGTGCCACGTTCTCTTCATTTCCAGACAATGTTGTTGCATCGGGCATTACTTTTAAGAACTCGTTTGATACTGCGGCAATATTAAGTTATGATGGGAAACGAATCCCAGCATTGGCTGCAAGGATATATGGAGACAAATCTGCATTTTACAATTGTAGTTTCATCGGTTTTCAAGATACATTGTGGGATGTGGAAGGTCGTCACTACTACAAAAATTGTCTCATTGAAGGTGCTGTCGACTTCATATGGGGCAGTGGACAATCTTATTTTGTGGATTGTGTGCTCAATGTGACTTCTTCGGGTTCCATAACAGCACAAGGACGCAGTTCAAATAGCGACCCAAGTGGTTTTGTGTTCCAACGAGGTTCTGTGGTTGGTAGCGGGAGCGCGATATTAGGGAGAGCCTATGATCGTTGTTCTAGAGTTATATTTTATGACACAAACTTGGGATCTGTGGTTGACCCTCAAGGATGGAATGCTTGGCATTATACAAAACATGAGTACGATTGA 837 0.4014 MKLLPREIIFSLILFIICSSKVCKAMDCGGTQVSRTIVVDQSGKSDFHTIQAAIDSIKTSNNKWVKIHIKAGTYTEQIQIPYNMPCIFLEGQGKEVTTVTYNDHQKTDISATFSSFPDNVVASGITFKNSFDTAAILSYDGKRIPALAARIYGDKSAFYNCSFIGFQDTLWDVEGRHYYKNCLIEGAVDFIWGSGQSYFVDCVLNVTSSGSITAQGRSSNSDPSGFVFQRGSVVGSGSAILGRAYDRCSRVIFYDTNLGSVVDPQGWNAWHYTKHEYD 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01447 278 Gene3D - 30 278 IPR012334 -
Gma10g01447 278 SUPERFAMILY Pectin lyase-like 31 275 IPR011050 -
Gma10g01447 278 Pfam Pectinesterase 37 272 IPR000070 GO:0030599|GO:0042545
Gma10g01447 278 PANTHER PECTINESTERASE 1 276 - -
Gma10g01447 278 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01447 Gma-Chr10 41548087 41549407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01447 10 276 Carbohydrate Esterase AT2G19150 42.909 2.35e-74 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01447 - - gmx:100800737 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01447 10 41548087 41549407 Gma10g01447 10 41548087 41549407 ECH