Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01445 ATGATTGAGGCAACATGGGAGATCTTATCCGTAAGAGATTCAAGTAATTCCGACACGTTGCGAGAATCCAATCACAAGAAGCGCAGAAAAATCGGAGACCACGCCGCCGGCGATCTCGATTTCGCCGCCGCCGTCCCTTGGAGATCCGACGTGGAGCAGCGGATCTACTCCCGCCGCCTCGTGGAGGCTCTCCGCCGCACTCCGTCATCGGCGACCAAGCCTAGAGCCGCCGGCCAGGTCCGCGAGACCGCCGACCGCGTCCTCGCCGCCACCGCCAGAGGCCGAACGAGGTGGAGCCGCGCGATTCTCAAGCGCTGGAGGAAGCTCCGCATGCAGCACAAGAAGGCGAAGGCGGCATCGTCCAACAACGGTTTGAAGAGAACGAGGATTGGAAACGGAGAGAGGAGGAACCGGTTACCGGCTGTTCAGAAGAAAGCGCGCGTTCTCAGCCGGTTGGTTCCCGGTTGCCGGAAGGTTTCGTTCCCGAACCTTCTGGAAGAAGCCACGGACTATATCTCCGCCTTGGAGATGCAAGTGCGAGCCATGACGGCTCTGGCCGAACTACTCGCCGGCGCCGCGCCGGCAAATCTCGCCGGCTCCGCGTTGAGTTGA 612 0.6144 MIEATWEILSVRDSSNSDTLRESNHKKRRKIGDHAAGDLDFAAAVPWRSDVEQRIYSRRLVEALRRTPSSATKPRAAGQVRETADRVLAATARGRTRWSRAILKRWRKLRMQHKKAKAASSNNGLKRTRIGNGERRNRLPAVQKKARVLSRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTALAELLAGAAPANLAGSALS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01445 203 CDD bHLH_AtIBH1_like 134 183 IPR044549 GO:0006355
Gma10g01445 203 PANTHER TRANSCRIPTION FACTOR BHLH150 18 202 - -
Gma10g01445 203 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 136 192 IPR036638 GO:0046983
Gma10g01445 203 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
Gma10g01445 203 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 18 202 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01445 Gma-Chr10 41527717 41529423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01445 22 182 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 46.893 2.05e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01445 - - gmx:100783462 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01445 10 41527717 41529423 Gma20g00939 20 35969565 35970594 ECH
Gma10g01445 10 41527717 41529423 Gma10g01445 10 41527717 41529423 ECH
Gma10g01445 10 41527717 41529423 Gma20g00939 20 35969565 35970594 GST
Gma19g02163 19 50482833 50483781 Gma10g01445 10 41527717 41529423 PCT
Gma03g02128 03 46783545 46784333 Gma10g01445 10 41527717 41529423 PCT
Gma10g01445 10 41527717 41529423 Gma19g02163 19 50482833 50483781 PCT
Gma10g01445 10 41527717 41529423 Gma03g02128 03 46783545 46784333 PCT