Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01442 ATGTCCGAAGACAAGTACGGCGTGCTCCTCTATTACAAGTACGCCGAAATTCCCAACCTCGACGACCTCCTCACCTTCTACCACTCCAACTGCTCCTCCCTCAGCCTCCTCGGTCGTGTTCGCCTTTCTTCTCACGGCGTCAATGTCACCGTTGGCGGCAACTTATCCTCTCTCGGGAATCACATCCAAGCCCTCAAAGCCTACAGCACCTTGTTTCACCACACTGATTTCAAGCTCGCCACTTGTCATCATCCATTAAACGACAAAGTAGCCCAGGAATGTGGTTTCACTTCCCTCTCTATTCGAATCGTCCACGAACTTGTTACTCTCAGTTCCCATCCACTGTTAAAGTCACCGAATATCTCAAATGCCGGAAAGCATCTCTCTTCCCTCCACAATACCAACAGTGAGAGTCCCGAAAAAGGCCTTGTTTTACTTGATGCAAGGAATCTGTATGAAACAAGAATTGGCAAGTTTGATGTGCCAAATGTTGAAACTTTGGATCCACAAGTTAGGCAGTTTAGTGATTTGTCCTCTTGGATAGATGACAATGGGGAGCGGTTGAAAGGAAAAAATATACTCATGTATTGTACTGGTGGAATCAGGTGTGAAATGGCATCGGCATATATTAGGTCAAAAGGTGCTGGGTTTGAGAATGTGTTTCAGTTATTTGGTGGCATACAACGGTATTTGGAGCAATTCCCAGATGGTGGGTTTTTCAAAGGAAAAAATTTTGTTTTTGATCACCGGATATCAGTTGGAAGTTCAGATGCTAATGTTATTGGGACCTGTCTTATTTGTCAATGTTCATTTGATGATTACTCTTCTCGCTGCCGGTGTGCTTACTGCCGAATGCTTGTTTTGGTTTGTGGTAGTTGCCAGAATGAATCTACACAGTACGTTTGTGAGCTATGTCAGAAACAGGGAAAGGCCGTTAGGTCAACACAATTAATTGAAAATGGTGAATCAAAAACATCATTGCCAGGTGTTGAATTCCAGAATTTTTCTTCAGATACTACTATGTGTTTGCCTCAAGTGCCTAGGGGAGATGATCCAAGGACCTCAAGAAAACTGAGAATATTGTGCTTGCATGGGTTCCGACAGAATGCATCCAGTTTCAAAGGCAGAACAGCATCACTAGCCAAGAAACTCAAGAAAATGACTGAATTTGTTTTTATCGACGCACCTCATGAATTGCCATTCATTTACCAAACCCCCATGCCTGAGCTCAATGTGAATTGTGCATCGTCATCGCCACCTAGTCCTCCTCCACCTTTGGATAATTGCAAGAAGAAGTTTGCATGGTTTGTGGCACCCAACTTTGATGGAAGTAGTGCTGCTGACTGGAAGGTAGCAGATGGTCCATTTGATCCACTTCAATACCAGCAGCAAACTAATGGATATGATATTTCGGTATCACACTTGAAGAATGTGTTTTCCCAAGAAGGACCATTTGATGGAATCTTGGGATTTTCACAGGGAGCAGCAATGACTGCCTTGATCTCTGCACAACAAGAAAAGCTGAAAGGTGAAATGGACTTTAAATTTGTAGTCCTGTGCTCTGGCTTTGCCCTCCGGATGAAGGAGATGGAGTGTGGCCCTATCAAGTGCCCTTCTCTTCATATTTTTGGTAATGAACATGGTAAAGACAGACAGATAGCTAACCAAGCTAGCAAGGAACTTGCTTCTCTATATGATAGTGATTGTTCTGCGATCGTTGAGCATGATTGTGGTCATATAATTCCTACCCGGTCCCCTTACATAGATGAGATCAAGGATTTCCTTGGGCGTTTTCTGTAG 1800 0.4367 MSEDKYGVLLYYKYAEIPNLDDLLTFYHSNCSSLSLLGRVRLSSHGVNVTVGGNLSSLGNHIQALKAYSTLFHHTDFKLATCHHPLNDKVAQECGFTSLSIRIVHELVTLSSHPLLKSPNISNAGKHLSSLHNTNSESPEKGLVLLDARNLYETRIGKFDVPNVETLDPQVRQFSDLSSWIDDNGERLKGKNILMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANVIGTCLICQCSFDDYSSRCRCAYCRMLVLVCGSCQNESTQYVCELCQKQGKAVRSTQLIENGESKTSLPGVEFQNFSSDTTMCLPQVPRGDDPRTSRKLRILCLHGFRQNASSFKGRTASLAKKLKKMTEFVFIDAPHELPFIYQTPMPELNVNCASSSPPSPPPPLDNCKKKFAWFVAPNFDGSSAADWKVADGPFDPLQYQQQTNGYDISVSHLKNVFSQEGPFDGILGFSQGAAMTALISAQQEKLKGEMDFKFVVLCSGFALRMKEMECGPIKCPSLHIFGNEHGKDRQIANQASKELASLYDSDCSAIVEHDCGHIIPTRSPYIDEIKDFLGRFL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01442 599 Gene3D - 116 268 IPR036873 -
Gma10g01442 599 SMART rhod_4 129 236 IPR001763 -
Gma10g01442 599 Pfam Rhodanase C-terminal 241 306 IPR022111 -
Gma10g01442 599 Pfam UPF0176 acylphosphatase like domain 7 106 IPR040503 -
Gma10g01442 599 Gene3D alpha/beta hydrolase 354 599 IPR029058 -
Gma10g01442 599 Gene3D - 1 108 - -
Gma10g01442 599 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 598 - -
Gma10g01442 599 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 598 IPR020936 -
Gma10g01442 599 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 129 253 IPR036873 -
Gma10g01442 599 Pfam Serine hydrolase (FSH1) 356 590 IPR005645 -
Gma10g01442 599 ProSiteProfiles Rhodanese domain profile. 139 239 IPR001763 -
Gma10g01442 599 SUPERFAMILY alpha/beta-Hydrolases 354 599 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01442 Gma-Chr10 41484202 41488060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01442 3 599 Sulfurtransferasese or Rhodanese AT1G09280 63.097 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01442 - - gmx:100799148 1206.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01442 10 41484202 41488060 Gma10g01442 10 41484202 41488060 ECH
Gma10g01442 10 41484202 41488060 Gma20g00936 20 35936167 35939768 GST