Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01425 ATGGATACCTTCCTGTTCACTTCTGAGTCGGTGAACGAGGGTCATCCCGACAAGCTGTGTGATCAGATATCTGATGCAGTGCTCGATGCCTGCCTGGAGCAAGACCCTGAAAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACTTGGTCATGGTATTTGGAGAGATCACCACAAAAGCCAATATAGACTATGAGAAGATTGTGCGCGATACGTGCCGTTCTATAGGATTTGTGTCTGGTGATGTTGGCCTTGATGCTGACAAGTGCAAGGTATTGGTGTACCTTGAGCAGCAAAGTCCTGACATAGCACAAGGAGTCCATGGCCACCTCACCAAGCGACCAGAAGACATAGGAGCTGGCGATCAGGGTCACATGTTTGGCTACGCCACAGATGAAACACCTGAGCTTATGCCTCTCAGCCATGTCCTTGCAACCAAGCTTGGCATGCAGCTCACTGAAGTGCGCAAGAATGAGATCTGTCCTTGGTTAAGACCTGATGGAAAAACTCAAGTCACTGTTGAGTATGCTAATGATCATGGTGCAATGGTCCCGGTGCGCGTCCATACTGTTCTCATATCCACTCAACATGATGAAACCGTTAccaatgatgagatagcagcagacctgaaagagcatgttatcaagcctgttattcctgagaagtacttggatgaggagacaattttccatctcaacccatctgggcgttttgtgattggtggtcctcatggcgatgctggtctcacgggtcgcaaaatcattgtcgacacatatggtggttggggagctcatggtggtggggccttctcagggaaggaccctaccaaggtggacaggagtggagcctacattgctagacaggctgccaagagcattgtggccaatggacttgccagaaggtgcattgtgcagatatcatatgcaattggtgttcctgagccattatcagtgtttgttgacacttttggcactggaaagattcctgacaaggacattctcaagcttgtcaaggaaaaatttgatttcaggccagggataatttccattaacttggaccttaagaggggtgcaagtggcaggttcttgaagactgctgcttatggccactttggaagagatgacccagacttcacatgggaggtggtcaagcctctaaagtGGGAATAA 1170 0.2556 MDTFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKANIDYEKIVRDTCRSIGFVSGDVGLDADKCKVLVYLEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGMQLTEVRKNEICPWLRPDGKTQVTVEYANDHGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEETIFHLNPSGRFVIGGPHGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVANGLARRCIVQISYAIGVPEPLSVFVDTFGTGKIPDKDILKLVKEKFDFRPGIISINLDLKRGASGRFLKTAAYGHFGRDDPDFTWEVVKPLKWE 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01425 389 CDD S-AdoMet_synt 5 384 - -
Gma10g01425 389 Pfam S-adenosylmethionine synthetase, central domain 117 238 IPR022629 GO:0004478|GO:0006556
Gma10g01425 389 SUPERFAMILY S-adenosylmethionine synthetase 240 387 IPR022636 GO:0004478|GO:0006556
Gma10g01425 389 ProSitePatterns S-adenosylmethionine synthase signature 1. 119 129 IPR022631 GO:0004478|GO:0006556
Gma10g01425 389 Gene3D - 117 381 - -
Gma10g01425 389 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 4 1 389 - -
Gma10g01425 389 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 1 389 IPR002133 GO:0004478|GO:0005524|GO:0006556
Gma10g01425 389 PIRSF MAT 1 388 IPR002133 GO:0004478|GO:0005524|GO:0006556
Gma10g01425 389 Pfam S-adenosylmethionine synthetase, C-terminal domain 240 381 IPR022630 GO:0004478|GO:0006556
Gma10g01425 389 SUPERFAMILY S-adenosylmethionine synthetase 3 109 IPR022636 GO:0004478|GO:0006556
Gma10g01425 389 SUPERFAMILY S-adenosylmethionine synthetase 115 239 IPR022636 GO:0004478|GO:0006556
Gma10g01425 389 Gene3D - 11 279 - -
Gma10g01425 389 Hamap S-adenosylmethionine synthase [metK]. 2 387 IPR002133 GO:0004478|GO:0005524|GO:0006556
Gma10g01425 389 ProSitePatterns S-adenosylmethionine synthase signature 2. 266 274 IPR022631 GO:0004478|GO:0006556
Gma10g01425 389 Pfam S-adenosylmethionine synthetase, N-terminal domain 4 101 IPR022628 GO:0004478|GO:0006556
Gma10g01425 389 Gene3D - 4 242 - -
Gma10g01425 389 TIGRFAM metK: methionine adenosyltransferase 5 386 IPR002133 GO:0004478|GO:0005524|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01425 Gma-Chr10 41316352 41318780 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01425 K00789 - gmx:100778809 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00362 17 2939657 2945195 Gma10g01425 10 41316352 41318780 ECH
Gma07g02260 07 45366165 45367343 Gma10g01425 10 41316352 41318780 ECH
Gma15g01802 15 21076119 21085499 Gma10g01425 10 41316352 41318780 ECH
Gma10g01425 10 41316352 41318780 Gma10g01425 10 41316352 41318780 ECH