Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01424 ATGGGTGCTGATCTTAAAGCTGAATTGTCCGGGAAAACTTTTGTTTTTGGTCTTAAGGTTTGGCAAATAATTGGAATTGCAGTTGGATTGTTTATTGTTGTCATCCTCTGTGTGCTCCCATTTTGCCTTAATTCAAGGAAGAAAACTAGAAGAGCCAGGAACAGGGTTCCTGCTACTCATATTCCTCCTGTCTCGAAGGAAATCACGGAAGTGCGGGTTGAGCAAGTGCCCGCGAATGGATTCGTTCCTCGCGAAGGAATACTTCTTACCATTCATGATAAGTCCAGTGACAAGGAATCAGACAAGGTTATGCTTCATTTAGGTGTTGGGAAGAAGAAGCATGGGGATAGTGGCAGTCATCACTCGGATTCGTTTCATTACTTGGATGGAGGTGGGTCACAATCAGGAGAAGAAATTAGCTCTGGCACGGTTGGAATTTACATGCCCTCTTCGTCACACCCTATAACAGCTCCTTCACCACTCTCAGGCCTTCCAGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACACTGAGGGATCTTGAACTTGCCACGAACCGTTTTTCAAAAGAAAATGTGATTGGTGAGGGTGGGTATGGAGTTGTTTACCGGGGACAGTTGATTAATGGGACTCCAGTGGCAGTTAAAAAGATACTCAATAACATTGGTCAAGCTGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTCCGACATAAAAACTTGGTTCGACTTTTGGGTTACTGCATTGAGGGGACTCACAGGATGTTGGTCTATGAGTATGTCAATAATGGAAACTTAGAGCAATGGCTTCATGGAGCTATGCGACATCATGGATATCTTACCTGGGAAGCACGTATCAAGATTCTCCTTGGCACAGCTAAGGGGCTTGCATATTTGCATGAAGCGATCGAGCCAAAGGTGGTACACCGAGATATCAAGTCAAGCAACATATTAATTgatgatgacttcaatgccaaggtttctgattttggcctggccaaGTTACTGGGTTCTGGGAAGAGTCATGTTGCAACACGAGTTATGGGAACCTTTGGatatgtggctcctgaatatgcaaatactggtcttctaaatgaaaaaagtgatgtttatagctttggtgttgtgctattggaagcaataactggaagagatccagttgactatggtcgTCCAGCACAGGAAGTTAATATGGTTGATTGGCTGAAGACAATGGTTGGAAACAGGCGATCAGAAGAAGTGGTGGACCCAAACATTGAGGTGAAGCCATCTACCAGAGTTTTGAAAAGGACGCTCTTAACGGCTTTAAGATGTGTAGATCCAGATTCCGAGAAAAGACCCAAGATGGGCCAAGTTGTGCGTATACTTGAGTCAGAGGAGTACCCTTTAGCAAGAGAGGACCGTAGGCACAGAAGAAATCGTGGGGTTAACTCAGAAATTGAATCCCATAAGGATAATTCTGACACAGATGGAAGTGACATTCAGGGCTCTAGATCAGAAAGCGGAAGGTAA 1521 0.3984 MGADLKAELSGKTFVFGLKVWQIIGIAVGLFIVVILCVLPFCLNSRKKTRRARNRVPATHIPPVSKEITEVRVEQVPANGFVPREGILLTIHDKSSDKESDKVMLHLGVGKKKHGDSGSHHSDSFHYLDGGGSQSGEEISSGTVGIYMPSSSHPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVIGEGGYGVVYRGQLINGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKGLAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGSGKSHVATRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPAQEVNMVDWLKTMVGNRRSEEVVDPNIEVKPSTRVLKRTLLTALRCVDPDSEKRPKMGQVVRILESEEYPLAREDRRHRRNRGVNSEIESHKDNSDTDGSDIQGSRSESGR 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01424 506 MobiDBLite consensus disorder prediction 466 494 - -
Gma10g01424 506 ProSiteProfiles Protein kinase domain profile. 188 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01424 506 MobiDBLite consensus disorder prediction 466 506 - -
Gma10g01424 506 SMART serkin_6 188 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01424 506 MobiDBLite consensus disorder prediction 112 145 - -
Gma10g01424 506 PANTHER OS01G0323000 PROTEIN 3 502 - -
Gma10g01424 506 Gene3D Phosphorylase Kinase; domain 1 170 263 - -
Gma10g01424 506 SUPERFAMILY Protein kinase-like (PK-like) 172 465 IPR011009 -
Gma10g01424 506 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 502 - -
Gma10g01424 506 Pfam Protein kinase domain 189 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01424 506 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Gma10g01424 506 Gene3D Transferase(Phosphotransferase) domain 1 264 476 - -
Gma10g01424 506 CDD STKc_IRAK 194 460 - -
Gma10g01424 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01424 Gma-Chr10 41310815 41315191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01424 165 462 Trihelix Transcription Factor Family AT1G70460 50.495 7.55e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gma10g01424 Pkinase 4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01424 - - gmx:100778269 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01424 10 41310815 41315191 Gma20g00917 20 35708347 35713021 ECH
Gma10g01424 10 41310815 41315191 Gma10g01424 10 41310815 41315191 ECH
Gma10g01424 10 41310815 41315191 Gma20g00917 20 35708347 35713021 GST
Gma10g01424 10 41310815 41315191 Gma03g02109 03 46633692 46638861 PCT