Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01421 ATGGGCGGAGGAGGCGGAGCGGCGACGGCGCAGGCAGAGGCGCAGTACTCGACGGCGAAGACGTCGGTGTGGTGGGACATAGAGAACTGTCACGTGCCGAAAGGATGCGATCCCCACGCCATCGCGCAGAACATAAGCTCCGCCCTCGTTCGCACGAACTACTGCGGCCCCGTTTCCATCTCCGCCTACGGCGACACCACTCGCATCACTGCCGTCGTCCAGCATGCCCTCTCCAGCACCGGCATCTCCCTCAACCATGTCCCCGCCGGCGTTAAAGATGCAAGTGACAAGAAGATTCTGGTTGACATGCTGTTCTGGGCAGTGGACAATCCTGCACCTGCTAATTACTTATTAATTTCTGGTGATCGAGATTTTTCCAATGCCCTTCATCAGTTGCGGCTCAGGAAGTATAATATCCTTCTTGCACAACCTCAGAAAGCTTCTGCACCATTAGTGGCAGCTGCTAAGAGTGTGTGGCTTTGGACTAGTCTCTTGGCTGGAGGACCCCCTCTTATGAATGGTGAATCACAACAACTTGGTAATAATAACATCCAATCATCTTCAGACACCTTACCTATTCCTGTCTCTAATGCTGTTCAGATACCACAGCACATGGGTTCCTTTTCAGAAGTTCATGCAGGAAATCAGAAATTTCCAAACACAGGAAGGCAACTTGATTCTAGACATCATGGGAAAACGAATGGGAGAAATCCAAGTAAAACAAATGGACCCAAGGCCCTGAATCCAGCTCCAGAAAATTATAGCAATATAAATTCTTCTCAAACTGGCAACTATACCCATAATGTTCCCCCAAGTGGATCTACCCCAAATTTTATTTGTGGCAATCCTGATCAAATGCGGGGCAAGAATGGTAATCTACATTCACAGCCATTAAGATCAAACTCTTTTCCTTTGCAACCTCCTTTTATACCAAATAATTCATTTTCTCCAAATCCCCAAACTTTTGCAACTTCAGTAGTGCCACCTAGAACTGGTGGACCCAGCTTCTCTGCAGCACCACTACTTAATGTACCAAATATTAGCAATCGGAAAATTTCTGGATATCCTAGTAATGCTCATGATCCACGCCCTGTTAAACAATGGAATGGAGACTTGAAACAAAGTTCTAACAATAATGCTCCAAGTCCTGTAAAGTCAATTGGCGAACAAACTGGACATATGGTACAGAACACACAACAATTGTATAATGGCCATCCACATGGTCCAGAATACCAACCTACATCATTGACAACTATGGGTAATAATAACCTTCCTGGCAATGGTATATGGGGATCTCCAGGATGCCCTAAACCTTCTGAATATGTCCAAGGTCTTATAGGGGTTGTTTTACTTGCCTTGAACACATTAAAAATTGAAAAAATTATGCCAACTGAGGCAAATATAACAGATTGCATTCGATGTGGAGATCCCAAGCACCGCAACACAGACGTCAAGAAGGCTCTGGAGAATGCTATTGAGCAGCAGATGGTGGTGAAGCAGAATGTAGGTGCTTTGCAGTTGTTTATTGGTAAGAATGATAAGGTTTGGAAGTGTGTAAGCCCTGTAGGTGGTAATCCTAAGAAGCACTCAAAAGAGACATGGAATGAAATTAAAAAATTCCTATCAACTCCTTCTGGAAGATTAGTCATAATGGGTACTCAGTGCAAGTATGAAGCAGGTATTGTGATTAGAAATATGTGCTTGAAAAATCATGCTTTGGGTGATGTCCTACAGATTTTGAACATGTTGATTACCATTAAAAAATGGATTGTGCATCAACAATCTGGCTGGCAACCACTTAACATCACTCTTACTGAGGTCAATTCTGATTCAGAGGACATAGCATGCCCATAG 1854 0.4417 MGGGGGAATAQAEAQYSTAKTSVWWDIENCHVPKGCDPHAIAQNISSALVRTNYCGPVSISAYGDTTRITAVVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRLRKYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLMNGESQQLGNNNIQSSSDTLPIPVSNAVQIPQHMGSFSEVHAGNQKFPNTGRQLDSRHHGKTNGRNPSKTNGPKALNPAPENYSNINSSQTGNYTHNVPPSGSTPNFICGNPDQMRGKNGNLHSQPLRSNSFPLQPPFIPNNSFSPNPQTFATSVVPPRTGGPSFSAAPLLNVPNISNRKISGYPSNAHDPRPVKQWNGDLKQSSNNNAPSPVKSIGEQTGHMVQNTQQLYNGHPHGPEYQPTSLTTMGNNNLPGNGIWGSPGCPKPSEYVQGLIGVVLLALNTLKIEKIMPTEANITDCIRCGDPKHRNTDVKKALENAIEQQMVVKQNVGALQLFIGKNDKVWKCVSPVGGNPKKHSKETWNEIKKFLSTPSGRLVIMGTQCKYEAGIVIRNMCLKNHALGDVLQILNMLITIKKWIVHQQSGWQPLNITLTEVNSDSEDIACP 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01421 617 CDD PIN_limkain_b1_N_like 20 144 - -
Gma10g01421 617 Pfam NYN domain 20 156 IPR021139 GO:0004540
Gma10g01421 617 Gene3D - 11 163 - -
Gma10g01421 617 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 3 602 - -
Gma10g01421 617 MobiDBLite consensus disorder prediction 355 381 - -
Gma10g01421 617 MobiDBLite consensus disorder prediction 236 250 - -
Gma10g01421 617 MobiDBLite consensus disorder prediction 211 250 - -
Gma10g01421 617 PANTHER LIMKAIN B LKAP 3 602 IPR024768 GO:0005777|GO:0010468|GO:1903231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01421 Gma-Chr10 41266797 41270601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01421 12 217 C2H2 Transcription Factor Family AT5G61190 67.308 4.16e-82 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01421 - - gmx:100794384 1255.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01421 10 41266797 41270601 Gma10g01421 10 41266797 41270601 ECH