Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01405 ATGAGAATGGGGAACCTCTTCTGGCTTGGCATTGTTGCAGCACTTGTTTTCAGCTTCTGGGTTGATTCCTTTTCTGCCTATGAATATCACCACTTCAATGAAACCGAGTTCTCTTTGTTGGAGTCTCAAGAACAGGTACATTCATCCCTCCTTGGGAGAACTTCTCTCATGGTTGGACTCACAGTTATTCAAAGTGCTGCTGGCAAAGGAGCAGTTTGCTTGGATGGAACATTGCCTGCTTATCATTTGCATCGGGGATATGGATCAGGAGCAAACAGCTGGATCGTTAATTTAGAGGGAGGTGGGTGGTGTAATGACGTTAGATCATGTGTTTATCGCAAGAAAACACGGCGTGGGTCATCAACATTCATGGAAAAACAGATACCTTTTACTGGAATATTAAGCAATAATGTTGAAGATAATCCAGATTTTTTCAACTGGAACAGAGTGAAAATTCGTTATTGTGACGGTGCCTCTTTTGCTGGGGATGGTGAAGATAAGGCTGCGCAACTGCAATTTAGAGGACAGCGTATTTGGTCGGCAGCAATCGAAGATTTGATGTCAAAGGGAATGCGATTTGCCAGGCAGGCTCTTCTTTCTGGATGCTCGGCTGGTGGTTTGGCTACTATTATACACTGTGATGAATTCAGAGGTTTTTTCCCACAGACTACGAAAGTGAAGTGTCTTAGTGATGCAGGATTATTTCTTGATGCGATTGATGTCTCCAGGGGACATACCATCAGGAATTTTTTCAGTGGTGTCGTAAGGCTACAGGGAGTGCAAAAGAATCTGCCACACATTTGTACTAGTCACCTTGATCCCACTTCGTGCTTCTTCCCTCAGAATTTGATTGCTGGTATTAGAACCCCGCTATTCATTCTTAATACTGCCTATGACTCATGGCAGGTCCAATCAAGCTTAGCTCCTTCATCAGCAGATCCCCATGGCTTTTGGCATGATTGCAGATTAAATCATGCTAAATGTACTTCTTCACAAATCCAATATTTGCAAGGATTCAGGAATCAAATGCTGAATGCTATTAAAGGCTTCTCAAGATCACGTCAGAATGGATTGTTCATAAATTCATGTTTTGCTCACTGCCAATCTGAGAGGCAGGATACATGGTTTGCTGACAACTCTCCTGTCATTGGGAACAAGGCAATTGCTCTTTCTGTTGGAGACTGGTATTTCGACCGAGCAGTTGTTAAGGCCATTGATTGTCCTTACCCTTGTGATAATACATGCCACCATCTTGTCTTCAGATGA 1266 0.4305 MRMGNLFWLGIVAALVFSFWVDSFSAYEYHHFNETEFSLLESQEQVHSSLLGRTSLMVGLTVIQSAAGKGAVCLDGTLPAYHLHRGYGSGANSWIVNLEGGGWCNDVRSCVYRKKTRRGSSTFMEKQIPFTGILSNNVEDNPDFFNWNRVKIRYCDGASFAGDGEDKAAQLQFRGQRIWSAAIEDLMSKGMRFARQALLSGCSAGGLATIIHCDEFRGFFPQTTKVKCLSDAGLFLDAIDVSRGHTIRNFFSGVVRLQGVQKNLPHICTSHLDPTSCFFPQNLIAGIRTPLFILNTAYDSWQVQSSLAPSSADPHGFWHDCRLNHAKCTSSQIQYLQGFRNQMLNAIKGFSRSRQNGLFINSCFAHCQSERQDTWFADNSPVIGNKAIALSVGDWYFDRAVVKAIDCPYPCDNTCHHLVFR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01405 421 PANTHER PECTIN ACETYLESTERASE 5 420 - -
Gma10g01405 421 PANTHER NOTUM-RELATED 5 420 IPR004963 GO:0016787
Gma10g01405 421 Pfam Pectinacetylesterase 54 400 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01405 Gma-Chr10 40932160 40937393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01405 2 421 Carbohydrate Esterase AT1G57590 64.387 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01405 K19882 - gmx:100810716 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01405 10 40932160 40937393 Gma20g00896 20 35338894 35343254 ECH
Gma03g02096 03 46496461 46500874 Gma10g01405 10 40932160 40937393 ECH
Gma19g02132 19 50212774 50217344 Gma10g01405 10 40932160 40937393 ECH
Gma17g00400 17 3245963 3250803 Gma10g01405 10 40932160 40937393 ECH
Gma10g01405 10 40932160 40937393 Gma10g01405 10 40932160 40937393 ECH
Gma10g01405 10 40932160 40937393 Gma20g00896 20 35338894 35343254 GST
Gma19g02132 19 50212774 50217344 Gma10g01405 10 40932160 40937393 PCT
Gma03g02096 03 46496461 46500874 Gma10g01405 10 40932160 40937393 PCT
Gma10g01405 10 40932160 40937393 Gma19g02132 19 50212774 50217344 PCT
Gma10g01405 10 40932160 40937393 Gma03g02096 03 46496461 46500874 PCT