Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01384 ATGACATCTTCATTCTCAACGCAGTTGGTGCAAAGTCAGAACCTACCTCCTCGTTTTCATCGCCATGTTTCAATGACACATGTGGTCCGTAGCAGTACCAAATCACAGCTTGGTTACGGTAAAACGTTGGCATCAAGATCTCACTATGCTGCCAGATTTTCAGTCTCACGACAATCTGAAGCAAAATCAATCACATATAGGAGAATGACATGTACTAATGCTAAGGAAAATGTAAGTGTTCTACAGCTGCAAGCCAAAGTGACAAACAAGTGCTTCTTTGATGTAGAAATTGGGGGTGAACCTGCTGGCAGAGTTGTTTTCGGCCTATTTGGAGAAGATGTTCCTAAAACAGTTGAAAATTTCCGGGCTTTATGTACAGGAGAGAAAGGATATGGCTACAAAGGGTCCTACTTCCATCGTATAATACAAAATTTCATGGTTCAGGGAGGGGACTTCACTGAAGGAAATGGAACTGGTGGAATCAGTATCTATGGTGATAGCTTTGACGATGAAAATTTTAACTTGAAGCATGTGGGTCCTGGAGTTTTGAGCATGGCAAATGCGGGTACTAATACCAATGGCAGTCAATTTTTTATCTGCACTGTACAGACTCCATGGTTAGACAATCGCCATGTTGTGTTTGGACATGTCATTGATGGAATGGATGTAGTGAGGACACTTGAATCGCAGGAGACAGGCAAGTTTGATAACCCTCGGAAGCCATGCAAAATTGCTGATTCTGGGGAGCTGCCTATAGATAGTTGA 765 0.4248 MTSSFSTQLVQSQNLPPRFHRHVSMTHVVRSSTKSQLGYGKTLASRSHYAARFSVSRQSEAKSITYRRMTCTNAKENVSVLQLQAKVTNKCFFDVEIGGEPAGRVVFGLFGEDVPKTVENFRALCTGEKGYGYKGSYFHRIIQNFMVQGGDFTEGNGTGGISIYGDSFDDENFNLKHVGPGVLSMANAGTNTNGSQFFICTVQTPWLDNRHVVFGHVIDGMDVVRTLESQETGKFDNPRKPCKIADSGELPIDS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01384 254 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 133 150 IPR020892 GO:0003755|GO:0006457
Gma10g01384 254 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 45 254 - -
Gma10g01384 254 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 93 247 IPR002130 GO:0000413|GO:0003755
Gma10g01384 254 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 45 254 - -
Gma10g01384 254 CDD cyclophilin_ABH_like 90 248 - -
Gma10g01384 254 SUPERFAMILY Cyclophilin-like 85 250 IPR029000 -
Gma10g01384 254 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 92 249 IPR002130 GO:0000413|GO:0003755
Gma10g01384 254 MobiDBLite consensus disorder prediction 232 254 - -
Gma10g01384 254 Gene3D - 78 253 IPR029000 -
Gma10g01384 254 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 138 150 IPR002130 GO:0000413|GO:0003755
Gma10g01384 254 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 181 196 IPR002130 GO:0000413|GO:0003755
Gma10g01384 254 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 196 208 IPR002130 GO:0000413|GO:0003755
Gma10g01384 254 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 124 IPR002130 GO:0000413|GO:0003755
Gma10g01384 254 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 209 224 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01384 Gma-Chr10 40677196 40680185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01384 103 247 U-box Gene Family AT5G67530 44.521 5.24e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01384 K03768 - gmx:100526955 499.59