Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01380 ATGACAATGAAGCTGGTTTTGGTAGTTGTTGTTGAAGTTGCATGCTTAGTTTCTGGGATCTTGTCCTTTGGATCTGAGACACTCTCTGAGCTTTCTTTCTTAGAAAACGATGTCGTCTCAACAACAAGACCTTCCTCTTCATCTCAACTTCAACCTCAACCTCTTATGGTGGACCTCACTCTCATTCATGAAGCTGATTCTAAAGGAGCTGTCTGTTTGGATGGAACGGTGCCTGGATACCATTTGGATCGTGGATTTGGATCTGGTGCAGATAGTTGGCTTATTCATTTGGAGGGAGGAGGATGGTGTAATACCATCAGAAACTGTGTCTATAGAAAAAATACTCGTCGTGGATCCTCAAAATACATGGAAAATCAAATACCATTCACGGGAATATTGAGCAACAAACCTGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTTAAATTACGGTACTGTGATGGAGCATCTTTCAGTGGAGATAGTGAAGATGAGTCTGCACAGCTCCAGTTTCGAGGACAAAAAATATGGCTAGCTGCAATGGAGGAATTAATGTCCAAAGGAATGCAGAAAGCCGATCAGGCACTTCTCTCTGGATGCTCTGCGGGTGGTCTGGCATCCATAATACACTGTGATGAGTTCGGGAGCTTGTTTGGAAAATCTTCCAAAGTTAAATGTTTGAGCGATGGAGGTTTTTTTCTTGATGCAATGGATGTATCTGGGGGACGCACACTGAGGACTCTTTTCGGAGGTGTGGTTCAGTTGCAGGATGTACAAAAAAATCTGCCAAAAAGTTGTCTCGACCAACTAGACCCAACTTCGTGCTTCTTTCCTCAGAATATGATCGAACATGTTGAGACCCCATTGTTTCTACTCAATGCTGCTTATGATGTGTGGCAGGTCCAAGCCAGTTTAGCCCCACCTTCAGCTGACCGCCTTGGTTCTTGGAATGAATGCAAATCGAACCATGCAAATTGTAGCTCATCTCAAATGCAGTTCCTTCAAGacttcagaaatcaaatgctgggtgacattaaagacttctcaagctcatctcaaactgggctattcataaattcttgttttgctcattgtcagtctgagagacaggagacatggtttgctgatgactctccccttatcgaggacaagCCAATTGCAGTTGCTGTTGGAGACTGGTATTTTGATCGAGAAGTTGTCAAAGCTATTGACTGTGCTTACCCGTGTGACAACAGCTGCCATAATCTGGTGTTTAACTTTAAGTGA 1269 0.3822 MTMKLVLVVVVEVACLVSGILSFGSETLSELSFLENDVVSTTRPSSSSQLQPQPLMVDLTLIHEADSKGAVCLDGTVPGYHLDRGFGSGADSWLIHLEGGGWCNTIRNCVYRKNTRRGSSKYMENQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDSEDESAQLQFRGQKIWLAAMEELMSKGMQKADQALLSGCSAGGLASIIHCDEFGSLFGKSSKVKCLSDGGFFLDAMDVSGGRTLRTLFGGVVQLQDVQKNLPKSCLDQLDPTSCFFPQNMIEHVETPLFLLNAAYDVWQVQASLAPPSADRLGSWNECKSNHANCSSSQMQFLQDFRNQMLGDIKDFSSSSQTGLFINSCFAHCQSERQETWFADDSPLIEDKPIAVAVGDWYFDREVVKAIDCAYPCDNSCHNLVFNFK 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01380 422 PANTHER PECTIN ACETYLESTERASE 2 420 - -
Gma10g01380 422 PANTHER NOTUM-RELATED 2 420 IPR004963 GO:0016787
Gma10g01380 422 Pfam Pectinacetylesterase 51 400 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01380 Gma-Chr10 40646780 40656346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01380 2 421 Carbohydrate Esterase AT3G62060 62.937 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01380 K19882 - gmx:100811787 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01380 10 40646780 40656346 Gma02g00060 02 721467 725793 GST
Gma19g02113 19 50023255 50028834 Gma10g01380 10 40646780 40656346 PCT
Gma03g02076 03 46323178 46328825 Gma10g01380 10 40646780 40656346 PCT
Gma10g01380 10 40646780 40656346 Gma19g02113 19 50023255 50028834 PCT
Gma10g01380 10 40646780 40656346 Gma03g02076 03 46323178 46328825 PCT