Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01372 ATGGAAAACCACCACCAAATGCAACAACCAAACCGTGAATTTACCATACTAAGATCCACCGATTTCCTCCGCCAGAATCTCAATTTATATCCCACAACCGTCAACACCGGAGAACATGCCGATCCTTCCATCAAAGAAGTGGATTTTTTCTCATCAAGATCACCAACAAAGAATAGTGACACTGATAACTCGAGTCCAGAAGAACCACATGATCATCGTCATACGAACATGGCTAAGGACGATGGATCACCAACTCTTTTCAATGATCAGCTCGTAAACACTGCGCTGAATCTAAGTCCGAGTGCTGGGTTATCAAGATCAGCAGCAAATGATGAAAATATTGAAACTTTGCTGACTACACTTCAAAGGGAATCACTAAGACTAAAAGAAGAGAATTGCAAACTGAGAACTATGTTGGACCAAATCACCAAAAACTACAACCAGTTACAATTGTTCATTGCTTTGCAGAAGCAGAAGCAGTGTCAGAAGATGGAGACAAATTTAAATGGGATGATGTTTGGTCAACATTTATTGGACCCACGAGGACCATTCACCAAATTAGATGCTCAAGTTGCACCATTTCCAGATGATAAATCTGGTCAACGGCAGGGTCTTCCTGAAACTGATCCTGTAGAAGATGTTCCTGAACAATCAACCTCACAGAGTTGGGGCTCATCCAAGAGTCCCAAGTTTGAAGAGTCCAACTCTAGTGAGCTTCCTTTAAAAAAAACCAGGGTTTCCGTGCGTGCAAGATCAGAAGCTCCTCTGATTAGCGATGGATGTCAATGGAGGAAATATGGACAAAAAATAGCCAAGGGAAATCCTTGTCCCCGTGCCTATTATCGTTGCACTATGGCCGTAGGATGCCCGGTTCGTAAGCAGGTAGTGCAAAGATGCATGGATGACAAGACGGTGTTGATAACAACCTACGAAGGCAATCATAACCATCCTCTTCCACCCTCAGCCATAGTCATGGCAAATTCTACCTCAGCAGCTGCATCTATGTTCTTATCTTCTTCATGTTCAACATCTAATAATAACGAAGCACTAAGTAACACTGTAGGAGTATTCTCTTCCATGCCCTACATCCCAATGGCAACGCTCTCAACCTCTGCACCATTTCCCACTATCACCCTTGACATGACCACCAACCCCTCTGCCCTAACATCCCCTCTTCCATTGCATGCAACTACTTTTCCTCAGCTACTAGGACACCCTGTCATCTTCCCCCACAAGATGCCACATCCATTATTAGGCCAACAACAACCTTTGTTTACGACAGAGACGATGAGTGCAGCTATTGCTTCCAATCCGAATTTCACTATAGCATTGGCAGCAGCGATCTCATCAATTATTGGAGCTCCTAGAGGAAATGATGGAATTAACAACAATAGTAGCAATGGTGGAAGTGATCTTCCTCTTAATGGGACATCTATGTTGCCTGGATCCACTTAG 1455 0.4357 MENHHQMQQPNREFTILRSTDFLRQNLNLYPTTVNTGEHADPSIKEVDFFSSRSPTKNSDTDNSSPEEPHDHRHTNMAKDDGSPTLFNDQLVNTALNLSPSAGLSRSAANDENIETLLTTLQRESLRLKEENCKLRTMLDQITKNYNQLQLFIALQKQKQCQKMETNLNGMMFGQHLLDPRGPFTKLDAQVAPFPDDKSGQRQGLPETDPVEDVPEQSTSQSWGSSKSPKFEESNSSELPLKKTRVSVRARSEAPLISDGCQWRKYGQKIAKGNPCPRAYYRCTMAVGCPVRKQVVQRCMDDKTVLITTYEGNHNHPLPPSAIVMANSTSAAASMFLSSSCSTSNNNEALSNTVGVFSSMPYIPMATLSTSAPFPTITLDMTTNPSALTSPLPLHATTFPQLLGHPVIFPHKMPHPLLGQQQPLFTTETMSAAIASNPNFTIALAAAISSIIGAPRGNDGINNNSSNGGSDLPLNGTSMLPGST 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01372 484 ProSiteProfiles WRKY domain profile. 252 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma10g01372 484 MobiDBLite consensus disorder prediction 462 484 - -
Gma10g01372 484 Gene3D WRKY domain 242 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma10g01372 484 MobiDBLite consensus disorder prediction 213 235 - -
Gma10g01372 484 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 39 483 - -
Gma10g01372 484 MobiDBLite consensus disorder prediction 33 84 - -
Gma10g01372 484 MobiDBLite consensus disorder prediction 184 247 - -
Gma10g01372 484 SUPERFAMILY WRKY DNA-binding domain 250 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma10g01372 484 MobiDBLite consensus disorder prediction 63 79 - -
Gma10g01372 484 Pfam WRKY DNA -binding domain 259 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma10g01372 484 SMART WRKY_cls 257 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma10g01372 484 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 39 483 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01372 Gma-Chr10 40526044 40530492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01372 121 452 WRKY Transcription Factor Family AT4G04450 42.640 4.72e-77 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma10g01372 WRKY 1.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01372 - - gmx:100780044 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01372 10 40526044 40530492 Gma02g00068 02 798178 802059 GST
Gma19g02106 19 49913147 49917653 Gma10g01372 10 40526044 40530492 PCT
Gma03g02070 03 46239635 46243933 Gma10g01372 10 40526044 40530492 PCT
Gma10g01372 10 40526044 40530492 Gma19g02106 19 49913147 49917653 PCT
Gma10g01372 10 40526044 40530492 Gma03g02070 03 46239635 46243933 PCT