Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01366 ATGGATGTGGAGAATGGCGAAGAGAGGAAACATGATGACGCAAGCACGTCAGAGAATCGTGCAGAAACCAGCACGAATGGGGAAAAGGAAGAAAAGAGCAAACAACAGGAAAAGCCCGAGACAGTTCCATTTCACAAGCTGTTCGCTTTTGCAGACTCCACTGACATTCTTTTGATGGCTGTTGGGACCATTGGAGCCATTGGAAATGGTTTGGGTTTGCCTCTCATGACTTTGCTGTTCGGTCAAATGATTGATAGCTTCGGTAGTAACCAGCGAAACACTAACGTTGTCGAAGAAGTATCCAAGGTTTCTCTTAAATTTGTGTACTTGGCAGTAGGATCTGGGTTGGCAGCGTTTCTCCAGGTGACTAGTTGGATGGTCACCGGGGAGAGACAAGCTGCACGGATAAGGGGATTGTATTTGAAAACAATTCTGAGACAAGATGTTGCTTTCTTTGATAAGGAAACGAACACGGGAGAGGTGATAGGGAGGATGTCTGGTGATACGGTTCTCATACAAGATGCCATGGGTGAGAAGGTTGGCAAATTTCTGCAGCTAATAGCAACATTCATTGGGGGATTTGTGATAGCATTTATCAAAGGGTGGCTTCTTACTGTTGTCATGTTGTCCACTCTTCCACTCCTTGCTTTGTCAGGTGCTACTATGGCCGTCATCATAGGCAGGATGGCTTCTCGAGGTCAAACGGCTTATGCAAAAGCTGCACATGTAGTTGAACAGACCATTGGATCAATAAGAACCGTTGCATCCTTCACTGGGGAAAAGCAAGCAGTATCTAGTTATAGCAAATTTCTTGTAGATGCTTACAAATCAGGAGTTCATGAAGGTTTCATAGCTGGAGCTGGTCTAGGCACAGTTATGTTAGTTATTTTCTGTGGTTATGCTTTGGCTGTATGGTTTGGCGCAAAGATGATAATGGAAAAAGGATATAATGGGGGCACAGTGATTAATGTGATTATTGCCGTGCTAACTGCTTCAATGTCTCTTGGAGAAGCATCCCCTAGCTTGAGTGCTTTTGCTGCAGGTCAGGCTGCAGCTTACAAAATGTTTCAGACAATTGAAAGGAAGCCAGAGATAGATGCTTATGATCCAAATGGAAAAATATTAGAAGACATTCAAGGCGAAATAGAGTTGAGGGATGTTTATTTCAGTTATCCAGCAAGACCTGAGGAACTGATATTTAATGGATTCTCTCTTCATATACCAAGTGGTACAACTGCGGCTTTAGTTGGACAAAGTGGAAGTGGAAAGTCTACGGTTATCAGCTTGGTAGAAAGATTCTATGACCCGCAGGCAGGTGAAGTTCTTATTGATGGCATCAACCTGAAAGAATTTCAGCTTAGGTGGATTAGAGGAAAAATTggccttgtcagccaggagccggtgttgtttgcatctagcattaaggataacattgcatatggaaaggagggagcaacaattgaagagattagatctgcatctgaacttgcaaatgctgctaaattcattgataagcttccacagGGATTGGACACAATGGTTTGTGAGCATGGAACTCAGCTGTCTGGTGGGCAGAAGCAACGCATTGCCATTGCAAGAGCAATCCTGAAAAATCCGAGAATCCTACTTCTAGATGAAGCAACAAGTGCACTTGATGCAGAGTCTGAAAGGGTAGTGCAAGAGGCTCTAGACAGGATCATGGTCAACAGAACTACTATTGTAGTGGCACATCGCTTGAGCACAGTGAGGAATGCTGATATGATTGCTGTCATTCATAGAGGGAAGATGGTTGAGAAAGGAACACACTCAGAATTACTCAAGGATCCTGAGGGAGCTTACTCTCAACTTATACGCCTACAAGAAGTAAGCAAAGAGACAGAAGGAAATGCTGACCAACACGACAAGACTGAACTTTCTGTAGAATCCTTTAGACAATCTAGTCAAAAGAGATCACTTCAAAGATCTATTAGTAGGGGTTCATCCTTAGGTAATAGTAGCCGCCACTCGTTTTCAGTTTCCTTTGGTTTACCCACAGGAGTTAACGTTGCTGATCCTGAACTTGAAAACTCACAACCCAAAGAAGAAGCACCAGAGGTTCCACTCAGCCGCCTTGCTTCCCTCAACAAGCCAGAGATTCCAGTTATTGTGATTGGATCTGTTGCCGCCATAGCAAATGGTGTTATATTTCCAATATTTGGCGTGCTGATTTCCAGTGTCATCAAGACGTTTTATGAACCATTTGATGAGATGAAAAAGGACTCCGAGTTTTGGGCACTGATGTTTATGATCCTTGGTCTTGCATCATTTCTTATAATTCCTGCACGAGGATACTTTTTTTCGGTGGCAGGATGCAAGTTAATCCAACGTATCAGGCTAATGTGTTTTGAGAAGGTTGTCAACATGGAGGTTAGTTGGTTTGATGAGCCTGAAAACTCAAGTGGTGCCATTGGTGCAAGGCTCTCAGCAGATGCTGCTTCTGTTCGTGCCCTTGTTGGTGATGCGCTGGGACTATTGGTTCAAAATTTCGCAACTGCATTGGCAGGTTTGATTATTGCTTTCGTTGCATCTTGGCAGCTGGCATTAATTATTCTTGTCTTGATTCCCCTGATTGGTGTAAATGGATATGTTCAAATGAAATTCATGAAGGGATTCAGTGCAGATGCAAAGATGATGTATGAGGAAGCAAGCCAAGTTGCTAATGATGCAGTTGGAAGCATAAGAACAGTTGCTTCTTTCTGTGCTGAAGACAAGGTTATGGAACTATACAAGAAGAAATGTGAGGGCCCAATGAAAACAGGGATACGGCAAGGGTTGATCAGTGGATCAGGATTTGGGGTTTCATTTTTCTTACTGTTTTGTGTTTATGCAACCAGTTTCTACGCAGGAGCTAGACTTATGGACTCTGGGAAGACAACATTCTCAGATGTTTTCCAGGTCTTCTTTGCATTAACTATGGCAGCTATTGGAGTCTCCCAATCAAGCTCCTTTGCTCCTGACTCAAGCAAAGCCAAGTCAGCTACTGCTTCCATATTCGGAATAATTGATAAGAAGTCAAAGATAGATTCCAGTGATGCGTCTGGTAGCACACTGGATAGCATTAAGGGAGAAATTGAGCTTCGTCATGTGAGCTTTAAGTATCCTTCTAGGCCTGATATGCAGATTTTCCGAGACCTCCGCTTGACTATCCATTCCGGCAAGACGGTGGCTCTTGTTGGTGAAAGTGGAAGTGGAAAATCCACAGTGATTGCCTTGTTGCAAAGATTTTATGATCCTGATTCAGGACAAATCACACTTGATGGGGTAGAAATTAGAGAGTTACAACTGAAGTGGTTAAGGCAGCAAatgggtcttgtaagccaagagccagttttgttcaatgagtctctacgtgccaatattgcctatggaaaaggaggtgatgctactgaagcagaaatcatagctgcagcagaattggccaatgctcataaattcattagtggcttacaacagGGTTATGATACTATAGTGGGAGAGAGGGGAACCCAATTATCTGGTGGGCAGAAGCAACGGGTAGCAATTGCTCGTGCCATAATTAAAAGTCCAAAGATATTGCTACTTGATGAGGCTACAAGTGCATTAGACGCTGAATCAGAAAGAGTTGTTCAAGATGCATTAGACAAAGTCATGGTGAACAGAACCACTGTGGTTGTGGCACATCGTCTATCTACAATCAAAAATGCAGATGTGATTGCTGTTGTGAAAAATGGAGTTATAGTGGAGAAAGGGAAGCATGAAAAGCTCATTAACCTCAGTGATGGATTTTATGCTTCCTTAGTCCAACTTCACACAAGTGCCTCAACAGTATGA 3849 0.3978 MDVENGEERKHDDASTSENRAETSTNGEKEEKSKQQEKPETVPFHKLFAFADSTDILLMAVGTIGAIGNGLGLPLMTLLFGQMIDSFGSNQRNTNVVEEVSKVSLKFVYLAVGSGLAAFLQVTSWMVTGERQAARIRGLYLKTILRQDVAFFDKETNTGEVIGRMSGDTVLIQDAMGEKVGKFLQLIATFIGGFVIAFIKGWLLTVVMLSTLPLLALSGATMAVIIGRMASRGQTAYAKAAHVVEQTIGSIRTVASFTGEKQAVSSYSKFLVDAYKSGVHEGFIAGAGLGTVMLVIFCGYALAVWFGAKMIMEKGYNGGTVINVIIAVLTASMSLGEASPSLSAFAAGQAAAYKMFQTIERKPEIDAYDPNGKILEDIQGEIELRDVYFSYPARPEELIFNGFSLHIPSGTTAALVGQSGSGKSTVISLVERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKEGATIEEIRSASELANAAKFIDKLPQGLDTMVCEHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERVVQEALDRIMVNRTTIVVAHRLSTVRNADMIAVIHRGKMVEKGTHSELLKDPEGAYSQLIRLQEVSKETEGNADQHDKTELSVESFRQSSQKRSLQRSISRGSSLGNSSRHSFSVSFGLPTGVNVADPELENSQPKEEAPEVPLSRLASLNKPEIPVIVIGSVAAIANGVIFPIFGVLISSVIKTFYEPFDEMKKDSEFWALMFMILGLASFLIIPARGYFFSVAGCKLIQRIRLMCFEKVVNMEVSWFDEPENSSGAIGARLSADAASVRALVGDALGLLVQNFATALAGLIIAFVASWQLALIILVLIPLIGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEDKVMELYKKKCEGPMKTGIRQGLISGSGFGVSFFLLFCVYATSFYAGARLMDSGKTTFSDVFQVFFALTMAAIGVSQSSSFAPDSSKAKSATASIFGIIDKKSKIDSSDASGSTLDSIKGEIELRHVSFKYPSRPDMQIFRDLRLTIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGQITLDGVEIRELQLKWLRQQMGLVSQEPVLFNESLRANIAYGKGGDATEAEIIAAAELANAHKFISGLQQGYDTIVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHEKLINLSDGFYASLVQLHTSASTV 1282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01366 1282 Gene3D ABC transporter type 1, transmembrane domain 105 1011 IPR036640 GO:0005524|GO:0016021
Gma10g01366 1282 MobiDBLite consensus disorder prediction 624 640 - -
Gma10g01366 1282 ProSitePatterns ABC transporters family signature. 1177 1191 IPR017871 GO:0005524
Gma10g01366 1282 SUPERFAMILY ABC transporter transmembrane region 703 1017 IPR036640 GO:0005524|GO:0016021
Gma10g01366 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 371 620 IPR027417 -
Gma10g01366 1282 CDD ABC_6TM_Pgp_ABCB1_D2_like 705 1020 - -
Gma10g01366 1282 CDD ABC_MTABC3_MDL1_MDL2 382 620 - -
Gma10g01366 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 60 347 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma10g01366 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 382 618 IPR003439 GO:0005524
Gma10g01366 1282 Pfam ABC transporter 401 549 IPR003439 GO:0005524
Gma10g01366 1282 Pfam ABC transporter 1056 1205 IPR003439 GO:0005524
Gma10g01366 1282 ProSitePatterns ABC transporters family signature. 521 535 IPR017871 GO:0005524
Gma10g01366 1282 SMART AAA_5 1064 1257 IPR003593 -
Gma10g01366 1282 SMART AAA_5 409 595 IPR003593 -
Gma10g01366 1282 SUPERFAMILY ABC transporter transmembrane region 40 366 IPR036640 GO:0005524|GO:0016021
Gma10g01366 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 716 1002 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma10g01366 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1037 1274 IPR003439 GO:0005524
Gma10g01366 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1029 1275 IPR027417 -
Gma10g01366 1282 Gene3D - 1027 1281 IPR027417 -
Gma10g01366 1282 CDD ABC_6TM_Pgp_ABCB1_D1_like 59 343 - -
Gma10g01366 1282 Pfam ABC transporter transmembrane region 716 987 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma10g01366 1282 Pfam ABC transporter transmembrane region 60 333 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma10g01366 1282 PANTHER - 19 1278 - -
Gma10g01366 1282 MobiDBLite consensus disorder prediction 623 667 - -
Gma10g01366 1282 MobiDBLite consensus disorder prediction 641 667 - -
Gma10g01366 1282 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 19 1278 - -
Gma10g01366 1282 Gene3D - 380 637 IPR027417 -
Gma10g01366 1282 CDD ABC_MTABC3_MDL1_MDL2 1037 1275 - -
Gma10g01366 1282 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01366 Gma-Chr10 40472776 40477994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01366 42 1276 Calmodulin-binding Proteins AT2G36910 44.988 0.0 1067
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01366 K05658 - gmx:100777909 2359.33