Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01351 ATGGCAACAAGCGAAGAAGTGGTTGCGGCGGCGCCGGAGGCAGCCGCGCCGGAGGCAGGGTTGAAGCACAAACTGGAGAGAAAATGGACGTTTTGGTGCGACAACCAATCCAAACCCAAGCAAGGCGCTGCTTGGGGAACCTCTCTTCGCAAGGTCTACACCTTCGACACCGTTGAAGAGTTCTGGTGTTTGTATGATCAGGTATTCAAGCCCAGCAAGTTGCAAATCAATGCCGATTTTCACTTGTTCAAGACTGGGATTGACCCTAAATGGGAAGATCCAGAGTGCGCCAATGGAGGAAAGTGGTCTATCACCAGCAACAGCGGCAGGAAGGCTAACCTTGATAACATGTGGCTTGAAACTATGATGGCTTTGATTGGGGAACAATTTGAGGATGCTGAGGACATATGTGGTGTGGTTGCTAGTGTGCGCCAGTGGCAGGACAAACTTTCGTTGTGGACAAAGACAGCAGCAAATGAAGCTGCCCAGGTTTTTTATTATCTTATGAGCATTGGAAGGAAGTGGAAGGAAATCATTGATGTTAACGACAAGATAACATACAACTTTCATGATGATTCTAGAAGCAAAGGAGCAACAAAGGGTCGATCATCATCTTCCGGCCCTCCTTTGGAGCTTCCAACATCTCTGCAGTTACCCGCGTTGAAAAGCTGGAGAGTTGATGCAAAAGTACTCTTCAAATCCAATTCTAACCTTTCCAGTTTGAAGCTCCGGAACACCTTTCAACACAAAATTGTGCTCTCTACTCCAAATCTTAGTTCTCTCACAATCATTGATCATTATGGTGTCAGTCATGAACCACTCTCCTCCCCATCTAATCTTTCATGTCTTGAAGAAGGAACTATTGACACCGATACTAATATATCATATTCAGTCTTCATAGGCTGGCTGCAAGTCTTCACTAATGTAAAGATATTGACACTTTCTTCTGATACCCTGAGATTACTGAAAGAGCTGTCAAATCTTCCTACAATGAGAACTCAACCTCCACGCTTTGTTAGATTGGAGACATTGAAAGTTAAAATGATTCCATACGTAGAAATATCTTATGAAGAACTAAAGAGGGCAGTGGAATACTTACTTCAGAACTCCCAACTAATCAGAGTTGTTGTCATAAAATGCTGA 1143 0.4392 MATSEEVVAAAPEAAAPEAGLKHKLERKWTFWCDNQSKPKQGAAWGTSLRKVYTFDTVEEFWCLYDQVFKPSKLQINADFHLFKTGIDPKWEDPECANGGKWSITSNSGRKANLDNMWLETMMALIGEQFEDAEDICGVVASVRQWQDKLSLWTKTAANEAAQVFYYLMSIGRKWKEIIDVNDKITYNFHDDSRSKGATKGRSSSSGPPLELPTSLQLPALKSWRVDAKVLFKSNSNLSSLKLRNTFQHKIVLSTPNLSSLTIIDHYGVSHEPLSSPSNLSCLEEGTIDTDTNISYSVFIGWLQVFTNVKILTLSSDTLRLLKELSNLPTMRTQPPRFVRLETLKVKMIPYVEISYEELKRAVEYLLQNSQLIRVVVIKC 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01351 380 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 20 195 IPR001040 GO:0003723|GO:0003743|GO:0006413
Gma10g01351 380 Pfam Eukaryotic initiation factor 4E 25 186 IPR001040 GO:0003723|GO:0003743|GO:0006413
Gma10g01351 380 Gene3D RNA Cap, Translation Initiation Factor Eif4e 15 203 IPR023398 -
Gma10g01351 380 ProSitePatterns Eukaryotic initiation factor 4E signature. 79 102 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Gma10g01351 380 MobiDBLite consensus disorder prediction 192 214 - -
Gma10g01351 380 PANTHER BNAA08G29940D PROTEIN 20 195 - -
Gma10g01351 380 SUPERFAMILY eIF4e-like 13 198 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01351 Gma-Chr10 40108890 40116269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01351 1 194 Eukaryotic Initiation Factors Gene Family AT5G35620 63.819 4.56e-82 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01351 K03259 - gmx:100499799 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01351 10 40108890 40116269 Gma10g01351 10 40108890 40116269 ECH
Gma10g01351 10 40108890 40116269 Gma20g00849 20 34011436 34015157 GST