Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01331 ATGTTGCAGGATGTTATCCACCCCTCAACACCGGCTGAGCAACTCCCCATTGATGAGATTTCAAGCCCGATTAGTGCTCGAATTTTCGAACTTTGCGAGCCTGATTTCTTCCCAGACACACTGCAAAATTCAGATGTTACTTCCAGCTCAAATTGTTGCCATGAAGAGAAGTCCTCATATGCCACAACCATATCTCCACCTTTAGATTTAGTAGACAACAAGATCAATATCAATAACAATAGCAACATAGTCACTACTACCTCATCTAGCACTACCACAACCAGCACCACAACCAACAACAACAACAACAACACAACGAACAGCAATAACCTGTCCATCCTCTTTGACACTCAAGATGAAATTGACAATGACATCTCAGCCTCCATAGACTTCTCATCATGTCGATCTTTAGTTGTTCCACCACTTCTCTCAATCTCAACTCAGCAGGATCAGTTTGATTTCTCTTCAGCTCAGCCACAGGTGCAACTATCAGCAGCAGCAGGTTCAGTTTTGAAGGGCCTCTCTCACTACCCTACAGATCATGTGATTGCACCCCTTATTGGATCTCCGTTACCATCTGTTTTTGATGAAGATTGCATATCTTCCATCCCTTCTTATGTGCCTCTCAACCCATCATCACCCTCTTGCTCTTATCTCAGTCCTGGCATAGGAGTGTACATGCCTCCTCCTGGTTCCCTTAACACTGCCTTATCTGCTGACAGTTCTGGATTGTTTGGTGGGAACATTCTACTGGGGTCTGAACTGCAGGCACATGAATTGGACTATCAGGGAGAAAATGGTGGAATATTTTGCACAGATTCAATTCAGAGGGTGTTTAACCCCCCAGATCTTCAGGCACTTGGTACTGAGACTCAGAAACTTGTAGCTGGGGCTGGAAGTTCTGCCACTTTGACACCAGAAATCTCACACTTGGAGGACTCTAACTTGAAAGTTGGAAAACTCTCTGTTGAGCAGAGGAAGGAAAAGATTCATAGATACATGAAGAAGAGAAATGAAAGAAATTTCAGCAAGAAAATCAAGTATGCTTGCCGCAAAACTTTAGCAGATAGCCGGCCCCGGGTTAGAGGAAGGTTTGCAAAGAATGATGAGTTTGGAGAGAGCCATAGACAAGGAAGTAGCAATCATGAAGAAGATGATGAAGAAATAATTGTGAAAGAAGATGATGATATGGTTGATTCCTCAGATATCTTTGCACATATCAGTGGAGTGAACTCTTTCAAATGCAACTATTCCATCCAGTCCTTGATTTGA 1272 0.4308 MLQDVIHPSTPAEQLPIDEISSPISARIFELCEPDFFPDTLQNSDVTSSSNCCHEEKSSYATTISPPLDLVDNKININNNSNIVTTTSSSTTTTSTTTNNNNNNTTNSNNLSILFDTQDEIDNDISASIDFSSCRSLVVPPLLSISTQQDQFDFSSAQPQVQLSAAAGSVLKGLSHYPTDHVIAPLIGSPLPSVFDEDCISSIPSYVPLNPSSPSCSYLSPGIGVYMPPPGSLNTALSADSSGLFGGNILLGSELQAHELDYQGENGGIFCTDSIQRVFNPPDLQALGTETQKLVAGAGSSATLTPEISHLEDSNLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDEFGESHRQGSSNHEEDDEEIIVKEDDDMVDSSDIFAHISGVNSFKCNYSIQSLI 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01331 423 MobiDBLite consensus disorder prediction 361 386 - -
Gma10g01331 423 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 17 423 - -
Gma10g01331 423 ProSiteProfiles CCT domain profile. 326 368 IPR010402 GO:0005515
Gma10g01331 423 MobiDBLite consensus disorder prediction 361 387 - -
Gma10g01331 423 PANTHER CCT MOTIF FAMILY PROTEIN 17 423 - -
Gma10g01331 423 Pfam CCT motif 326 368 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01331 Gma-Chr10 39364872 39369091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01331 326 384 C2C2-CO-like Transcription Factor Family AT5G57660 45.312 3.40e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma10g01331 CCT 5.6e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01331 - - gmx:100807304 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01331 10 39364872 39369091 Gma10g01331 10 39364872 39369091 ECH
Gma10g01331 10 39364872 39369091 Gma20g00842 20 33798337 33802734 GST