Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01279 ATGCGGCGCCCCGACCGCGATATTTTCTCGAGCCGTTCAGAGCAGACAACATCAACGGAAGGGCCTGTTTTGGAGGAGTTTATTCCAATCAAGAAAAGGGCATCATCATCCCTTTTTTGTGATGAAGAGGATGAGGATGATGAGCAACATTCTCACAAGCAAAGGGAGCTAGAAAAGAAGAGAAAGGAAAAGACACAATTGGTTTATGAGAGAAAGAAGCAGCTCAACAAATTAAGGGTGAAAGCCGAGAAGGTTGCTGAAGACAAGCTCGGTTCCCAACTTGATATCCTTGCTCCAGTCAAGTATTGA 309 0.4498 MRRPDRDIFSSRSEQTTSTEGPVLEEFIPIKKRASSSLFCDEEDEDDEQHSHKQRELEKKRKEKTQLVYERKKQLNKLRVKAEKVAEDKLGSQLDILAPVKY 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01279 102 MobiDBLite consensus disorder prediction 38 64 - -
Gma10g01279 102 PANTHER 60S RIBOSOMAL PROTEIN L13A-1-RELATED 49 102 - -
Gma10g01279 102 MobiDBLite consensus disorder prediction 46 64 - -
Gma10g01279 102 Gene3D - 55 102 - -
Gma10g01279 102 PANTHER RIBOSOMAL PROTEIN L13 49 102 IPR005822 GO:0003735|GO:0005840|GO:0006412
Gma10g01279 102 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01279 Gma-Chr10 37846814 37847778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01279 37 102 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 65.152 8.82e-22 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01279 K02872 - gmx:100813340 88.9669