Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01276 ATGTTAGGAGGGTCTATTCTTGGAGTGAAGTTTCTAGATTCCCTTGCTGGATTTCTCATCTCAAGCATGATTTTGAAAGCTGTAGTTGAAACAGGTTACCAGAAGTGTATGTGCAGTGAGTGTGCAAATGCTCTTCGACATCAATCCAATAACTGCCCTATATGCCGGCAGCCTATTGAGGAACTTGTAGAGATCAAGGTGAACAATGGTGATCAAAGAGATTTTTTCTGA 231 0.4113 MLGGSILGVKFLDSLAGFLISSMILKAVVETGYQKCMCSECANALRHQSNNCPICRQPIEELVEIKVNNGDQRDFF 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01276 76 SUPERFAMILY RING/U-box 37 62 - -
Gma10g01276 76 Pfam Zinc finger, C3HC4 type (RING finger) 36 61 - -
Gma10g01276 76 PANTHER MAHOGUNIN 36 71 IPR045194 GO:0061630
Gma10g01276 76 PANTHER E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED 36 71 - -
Gma10g01276 76 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 66 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01276 Gma-Chr10 37698864 37699525 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01276 36 73 C3H Transcription Factor Family AT3G06140 71.053 4.91e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01276 - - gmx:102660432 91.2781