Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01254 ATGGCTGGGGATATCAAGGAGGAGAGAGCTTTGGCAAAAGGGTATTCTGTTATTTTACTGCTATTGACTTTACTTGTTTGTAGCACGGAGGGGTTGAACACTGAGGGAAAAATCCTCCTAGAGCTCAAGAAAGGACTTCATGATAAATCCAAAGTTCTGGAAAATTGGAGGTCTACTGATGAAACCCCATGTGGGTGGGTAGGTGTAAACTGCACTCATGATAATATTAATAGTAATAATAATAATAACAACAACAACTCTGTGGTTGTATCTCTTAATTTGAGTTCAATGAATCTTTCTGGAACTCTAAATGCTGCTGGCATTGAGGGTCTGACCAATCTAACTTATCTCAATCTTGCTTACAATAAGCTGAGTGGAAATATCCCCAAGGAGATTGGTGAGTGCTTGAATTTGGAATATCTTAATTTGAACAATAATCAGTTTGAGGGGACAATTCCTGCTGAATTGGGTAAGCTGTCTGCTTTGAAAAGTTTGAATATTTTCAACAACAAACTCTCTGGTGTGCTTCCAGATGAACTTGGGAACTTGTCTTCATTGGTTGAGTTAGTGGCCTTTAGCAACTTTCTTGTTGGACCCTTACCTAAATCCATTGGAAATCTTAAGAATCTTGAAAATTTCAGAGCTGGGGCAAATAACATTACCGGTAACTTGCCAAAGGAAATTGGTGGATGTACAAGCTTAATACGTCTTGGTCTTGCTCAAAATCAGATAGGAGGGGAGATACCAAGGGAGATTGGGATGCTTGCTAAGTTGAATGAACTGGTTTTATGGGGAAACCAGTTTTCAGGACCTATTCCTAAAGAGATTGGGAATTGTACCAATCTTGAGAACATTGCTCTGTATGGGAATAATCTTGTTGGACCTATACCTAAGGAAATTGGGAACCTCAGATCATTGAGGTGTCTGTATCTTTACAGAAACAAGTTGAATGGAACCATTCCAAAGGAAATTGGAAATCTTTCTAAATGTTTATGCATTGATTTCTCAGAGAACTCTTTAGTAGGTCATATCCCTTCAGAGTTTGGCAAAATACGTGGTCTAAGTTTGCTCTTTCTCTTTGAGAACCATCTAACCGGTGGTATACCAAATGAGTTTAGTAACTTGAAGAACCTGTCAAAGCTGGACCTGTCAATAAATAATCTCACAGGTTCAATTCCATTTGGCTTCCAATATTTACCTAAAATGTATCAGTTGCAGCTCTTTGACAACTCCCTAAGTGGTGTTATTCCTCAGGGACTAGGACTTCATAGTCCTCTTTGGGTGGTTGATTTTTCTGACAACAAATTGACAGGAAGAATACCGCCTCATCTATGCCGAAATTCTGGCTTGATATTGTTGAATCTGGCAGCTAATAAGCTCTATGGAAATATACCAGCAGGGATACTAAACTGTAAATCATTGGCACAGTTGTTGTTACTTGAAAACAGGCTTACTGGCAGCTTCCCTTCTGAATTGTGTAAGCTGGAGAACTTGACTGCCATTGATTTGAATGAGAACAGGTTCAGTGGTACACTCCCTTCTGATATTGGGAACTGCAACAAATTGCAAAGGCTTCACATTGCCAACAATTACTTCACATTGGAGTTGCCTAAGGAAATTGGAAATCTCTCTCAATTGGTGACCTTCAATGTTTCATCAAATCTTTTCACTGGAAGAATCCCACCGGAAATTTTTTCTTGTCAAAGGCTACAGCGGCTTGATCTCAGCCAGAATAACTTTTCTGGTTCCTTGCCAGATGAGATTGGAACACTTGAGCATTTGGAAATTCTCAAGCTCTCAGACAATAAGCTGTCTGGATATATTCCTGCAGCACTAGGCAATCTGTCTCATTTGAACTGGTTGTTGATGGATGGCAATTATTTCTTTGGTGAAATACCTCCCCAATTGGGTTCTCTTGAAACTTTGCAAATTGCAATGGATCTCAGTTACAATAACCTTTCTGGAAGAATACCGGTTCAGCTTGGCAATCTCAACATGCTTGAATATCTCTATCTCAATAACAACCATTTGGATGGTGAAATTCCCAGCACATTTGAAGAGCTTTCAAGCTTGTTGGGGTGCAATTTCTCATACAACAACCTCTCTGGTCCTATTCCTTCCACAAAAATTTTCCGAAGTATGGCTGTAAGCAGCTTTATTGGTGGTAACAATGGCCTCTGTGGTGCACCTCTCGGTGACTGCAGTGATCCAGCTTCTCGCTCTGATACTCGTGGGAAAAGTTTTGATTCTCCTCATGCTAAAGTAGTCATGATCATTGCAGCTTCTGTTGGAGGTGTTTCACTCATTTTCATTTTAGTTATTTTACATTTTATGAGACGTCCTCGGGAGTCAATTGATTCCTTTGAAGGCACTGAGCCTCCCTCCCCAGATTCAGATATCTATTTCCCTCCAAAGGAAGGTTTCGCTTTCCATGATCTAGTTGAAGCCACAAAAGGATTTCATGAAAGCTATGTTATTGGTAAGGGAGCATGTGGAACTGTTTATAAGGCCATGATGAAATCTGGTAAGACCATTGCAGTTAAGAAGTTAGCATCTAATAGGGAAGGGAACAACATTGAGAATAGTTTCAGGGCTGAAATAACTACTCTGGGAAGGATAAGGCATCGTAATATAGTGAAATTGTATGGCTTTTGCTATCAACAGGGTTCCAATCTCCTGCTTTATGAGTACATGGAAAGAGGTAGCTTAGGTGAACTATTACATGGTAATGCAAGTAATCTGGAGTGGCCAATTCGGTTCATGATTGCTCTTGGAGCTGCTGAGGGTCTTGCCTACTTGCATCATGACTGCAAACCCAAGATTATTCACCGCGATATAAAATCTAACAACATTCTTCTGGATGAAAATTTTGAGGCCCATGTTGGTGATTTTGGTTTGGCAAAAGTGATTGACATGCCTCAGTCAAAATCAATGTCTGCTGTTGCTGGATCTTATGGCTATATTGCTCCTGAATATGCATATACCATGAAGGTCACAGAAAAGTGTGACATTTACAGCTATGGTGTGGTGCTCTTGGAATTGCTAACTGGAAGAACACCAGTTCAGCCACTAGAGCAAGGAGGTGATCTTGTCACATGGGTGAGGAACTGTATCCGGGAGCACAACAACACATTGACACCAGAGATGCTAGACAGTCACGTTGATCTTGAAGACCAAACCACTGTGAATCACATGCTCACTGTTTTGAAGCTTGCTTTACTCTGCACAAGTGTCTCTCCTACCAAGAGGCCATCAATGCGCGAAGTCGTGTTGATGCTTATCGAGTCGAATGAGCGAGAAGGAAACTTAACACTCACTCAAACATACAATGATCTTCCTTCCAAAGATGGCATGTGA 3357 0.4063 MAGDIKEERALAKGYSVILLLLTLLVCSTEGLNTEGKILLELKKGLHDKSKVLENWRSTDETPCGWVGVNCTHDNINSNNNNNNNNSVVVSLNLSSMNLSGTLNAAGIEGLTNLTYLNLAYNKLSGNIPKEIGECLNLEYLNLNNNQFEGTIPAELGKLSALKSLNIFNNKLSGVLPDELGNLSSLVELVAFSNFLVGPLPKSIGNLKNLENFRAGANNITGNLPKEIGGCTSLIRLGLAQNQIGGEIPREIGMLAKLNELVLWGNQFSGPIPKEIGNCTNLENIALYGNNLVGPIPKEIGNLRSLRCLYLYRNKLNGTIPKEIGNLSKCLCIDFSENSLVGHIPSEFGKIRGLSLLFLFENHLTGGIPNEFSNLKNLSKLDLSINNLTGSIPFGFQYLPKMYQLQLFDNSLSGVIPQGLGLHSPLWVVDFSDNKLTGRIPPHLCRNSGLILLNLAANKLYGNIPAGILNCKSLAQLLLLENRLTGSFPSELCKLENLTAIDLNENRFSGTLPSDIGNCNKLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNLFTGRIPPEIFSCQRLQRLDLSQNNFSGSLPDEIGTLEHLEILKLSDNKLSGYIPAALGNLSHLNWLLMDGNYFFGEIPPQLGSLETLQIAMDLSYNNLSGRIPVQLGNLNMLEYLYLNNNHLDGEIPSTFEELSSLLGCNFSYNNLSGPIPSTKIFRSMAVSSFIGGNNGLCGAPLGDCSDPASRSDTRGKSFDSPHAKVVMIIAASVGGVSLIFILVILHFMRRPRESIDSFEGTEPPSPDSDIYFPPKEGFAFHDLVEATKGFHESYVIGKGACGTVYKAMMKSGKTIAVKKLASNREGNNIENSFRAEITTLGRIRHRNIVKLYGFCYQQGSNLLLYEYMERGSLGELLHGNASNLEWPIRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLEQGGDLVTWVRNCIREHNNTLTPEMLDSHVDLEDQTTVNHMLTVLKLALLCTSVSPTKRPSMREVVLMLIESNEREGNLTLTQTYNDLPSKDGM 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01254 1118 ProSitePatterns Serine/Threonine protein kinases active-site signature. 941 953 IPR008271 GO:0004672|GO:0006468
Gma10g01254 1118 SUPERFAMILY L domain-like 261 532 - -
Gma10g01254 1118 Gene3D Phosphorylase Kinase; domain 1 796 897 - -
Gma10g01254 1118 Gene3D Ribonuclease Inhibitor 193 285 IPR032675 -
Gma10g01254 1118 Pfam Protein kinase domain 821 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01254 1118 Gene3D Ribonuclease Inhibitor 398 738 IPR032675 -
Gma10g01254 1118 Pfam Leucine Rich Repeat 137 159 IPR001611 GO:0005515
Gma10g01254 1118 Pfam Leucine Rich Repeat 667 688 IPR001611 GO:0005515
Gma10g01254 1118 Pfam Leucine rich repeat 569 627 IPR001611 GO:0005515
Gma10g01254 1118 SUPERFAMILY L domain-like 470 732 - -
Gma10g01254 1118 SMART LRR_typ_2 591 614 IPR003591 -
Gma10g01254 1118 SMART LRR_typ_2 255 279 IPR003591 -
Gma10g01254 1118 SMART LRR_typ_2 664 687 IPR003591 -
Gma10g01254 1118 SMART LRR_typ_2 303 327 IPR003591 -
Gma10g01254 1118 SMART LRR_typ_2 543 567 IPR003591 -
Gma10g01254 1118 SMART LRR_typ_2 159 182 IPR003591 -
Gma10g01254 1118 SMART LRR_typ_2 495 519 IPR003591 -
Gma10g01254 1118 SMART LRR_typ_2 111 135 IPR003591 -
Gma10g01254 1118 SMART LRR_typ_2 375 398 IPR003591 -
Gma10g01254 1118 SMART serkin_6 820 1093 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01254 1118 ProSiteProfiles Protein kinase domain profile. 820 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01254 1118 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1104 - -
Gma10g01254 1118 SUPERFAMILY L domain-like 35 317 - -
Gma10g01254 1118 Gene3D Transferase(Phosphotransferase) domain 1 898 1111 - -
Gma10g01254 1118 Gene3D Ribonuclease Inhibitor 31 192 IPR032675 -
Gma10g01254 1118 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Gma10g01254 1118 Gene3D Ribonuclease Inhibitor 286 397 IPR032675 -
Gma10g01254 1118 SUPERFAMILY Protein kinase-like (PK-like) 798 1093 IPR011009 -
Gma10g01254 1118 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 1104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01254 Gma-Chr10 36970047 36975251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01254 32 1095 Receptor kinase-like Gene Family AT5G56040 38.540 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma10g01254 Pkinase 2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01254 - - gmx:100807838 2147.86