Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01252 ATGGGGAAGCGAATTTGCGAGAAAGAATGTGCATTGTCTAATGGAAATAGCCATCACACTCATCCAGGACGAGTATGGGGAATGCTTCACGTTATAAGGTACCATCATTGGCGTCAGGTCAAGAGAAGGCTTACACACAGGAGGCATGGTGGTGAAAGACTTGATGCTAGAGCTGGAATTCCAGGAACTTCTGATGATTCTGGGGTTCACTCTATGGGAGAACATGATAAGCCACATACAGAACTATCTAATGTTGAAGAAGAGCTGGTACACTCCTCTCAGCCTGCCAAAAATTCCATCAAATCCAGATTAAGGTCACTTCTTAATGAAGATATATACAGAAAGAAGGGTCGACACAAGAGAAGCTCAACCTGCCCTGCAAAGTCGCAACTAACTCAAGCTGTTTCTGTTCACAACATAGAGGTTGATCCACTTAGTGAATTGTTACTGAATGTTCAGAGCCCTGAACCAGTCCTAGAAACCTTTCAAAACCGTCTTGCTGCTGGCACATTGGATGTGTTGTCACCAGTTTTCTCCGAGAAACCAATTGCCAACAATGACAAATGTGTAGATTGTGGAACAATGTTTTCTAAAGACATTTTGGATCATAGCAAGATTCATAAGCACTTTTGCTCTCCTAGTCAAGGTGGTCCTGAAAAGAAGTCGATGAATGCACAGATACTTACAACTGATGCTTCACCCCATCTTTTCAAGGACTTTCTTGATGCATTGGATGTGATCAACACAAACAAGGACTTCCTATTAGAACATATACAGGATCCAGGCTCTCCTTTGCCATTCCACACTCACAATCAACAGTCTTTCAATGGTAAACAGAGACGATCCAAATCTCTCTCATTTCCTGTATCAGCCTCATCGTCAGGAAGCCAAGATTCTGTTCATGGCCAACTCATAAACCAAATGGTAGATGATTGGTTGGATTCAGAAGAAGAGAAGTTACAAAATCAAAGTAACATGCAAAATACAAGCATGGATGAGTCCTCAGAAGATTCTTACCAACAGACCATTCCATCAGGTTCTTCAAATAATTTTGATCAATGGGGTGAAAGAGATTCTAATTCTTCATCAGTTTCGTCTCAGGTTCCCAACAATGTGAAAACTAGGCATTTCAGGAATCTTAGAAAGAAGATGAGGCACATAATTGATGATGGAAGAAATGAAAAGCATCGCATTACCATGGATGCTATACTTGACAAAATTCCTAGCGGAAAGAGGCTCACCAAAAATGTGAAGAAGTTTATCCATGACAAATCCAAAAACCCCACAATTAAAGGGGAAGGTGAAGACAGTGCAACAAGAGGTTTTGGTAGCCGTCTCTCGTCTAATTCCTTCAACAAGCATCAACCACCACCCATGAGGAATTCATCTCTAAAAGATTCAGCTGGTAGATATTCTCAGTTGTATCATCAGACTTGTTTTAACAGTGAAGCCAAGTATCCTAAGACTGAGAACTTAAGATTGAGAACAGAAGAGAGAAATTCTATATTAAAGACCCCAAAATCCTTTAAAAGGTTTCTTTCAATGCCTaatttaaaatcttactttcaccagaatgaggagctgcctttacctttatccccccagagttcaatcaagaaatctggagatagaaccactaaatttaaatcttactttcaccagaatgaggagatgcctttacttttatccccccagaattcaatcaagaaatctggagatagaaccacAAGCACAAATGTCATTGATCAGCAGCAAAGTTGGTTTGACCATAATGATGATTCAAAGAGTCAAATTTTGCCACCTACATTTGCTGATAACACAAATCAAGAATGTAGTTTGAATGCTGACCAAAAGCAACTTCTTGTCAGGAGTGCTTCAAAATCAGGAATAGATTTTAGTACCGAGGAAAAGGCAGATAAGAGCATACGAATTGAAGGTTTTGGTGACTTGAGAGACAGTGAACATGACATTGGAGCTGAAACAGAATCTGTTTCTGTGCCAGCGGAAGCAAACTCAGTCTTCTCTTCTGACACCAGCTTTCTAGATTTTACATTTGATCTTGAGAACTTAAACATACAGGAAGAAGAATCAGACACAGAAATAAAGCCAGTGCAAGATGATGGATTAGATGATATGGCTGAGCAACAAGAGGCTAAGGAGGATCACCCTGAGGAGGTTGAGAATTTTCAAAACATTGGAACTTTAAGCAAGCGTTTCAACTATGAAATTCCATGTATTGAAGTGGATCCAAGTAATGAAGCTGCATTTAATTATGTGAGAAAGGTTTTAGAGCTCTCTGGGTTCACTGGCCATGATTCCCTTGGGATATGGTATTCTGATAACCAACCACTTGATCCTTCAATGTATGAAGAATTGGAGGGGTGCTTGCTTCTTGATCCTGATTGTTCTGGTAATAGTGGTGAAGGTGGAGAATGTAATCATCATCTGCTTCTGTTTGATATAATCAATGAAGGGTTGTTGGAGATTTTTGGCAGATCATACAACTATTATCCAAGACCCTTGTCTTATCTCTCCCATGTTCATCCACTTCCAGCAGGAGAAAATGTTCTCTATAAAGTGTGGACACTCATTAGCTGGTATCTGATGAACTCAACAACATATGAGCTTTATCCGTCATTGGATTATTATGTGAGCAAAGATCTTGCAAAATATGATGGGTGGATGAATCTCCAATTTGATTCTGAATGTGTGGGGCTTGAGCTAGATGACTTGATTTTTGATGATCTATTGGAGGAAATAATCTCCACCTAA 2772 0.373 MGKRICEKECALSNGNSHHTHPGRVWGMLHVIRYHHWRQVKRRLTHRRHGGERLDARAGIPGTSDDSGVHSMGEHDKPHTELSNVEEELVHSSQPAKNSIKSRLRSLLNEDIYRKKGRHKRSSTCPAKSQLTQAVSVHNIEVDPLSELLLNVQSPEPVLETFQNRLAAGTLDVLSPVFSEKPIANNDKCVDCGTMFSKDILDHSKIHKHFCSPSQGGPEKKSMNAQILTTDASPHLFKDFLDALDVINTNKDFLLEHIQDPGSPLPFHTHNQQSFNGKQRRSKSLSFPVSASSSGSQDSVHGQLINQMVDDWLDSEEEKLQNQSNMQNTSMDESSEDSYQQTIPSGSSNNFDQWGERDSNSSSVSSQVPNNVKTRHFRNLRKKMRHIIDDGRNEKHRITMDAILDKIPSGKRLTKNVKKFIHDKSKNPTIKGEGEDSATRGFGSRLSSNSFNKHQPPPMRNSSLKDSAGRYSQLYHQTCFNSEAKYPKTENLRLRTEERNSILKTPKSFKRFLSMPNLKSYFHQNEELPLPLSPQSSIKKSGDRTTKFKSYFHQNEEMPLLLSPQNSIKKSGDRTTSTNVIDQQQSWFDHNDDSKSQILPPTFADNTNQECSLNADQKQLLVRSASKSGIDFSTEEKADKSIRIEGFGDLRDSEHDIGAETESVSVPAEANSVFSSDTSFLDFTFDLENLNIQEEESDTEIKPVQDDGLDDMAEQQEAKEDHPEEVENFQNIGTLSKRFNYEIPCIEVDPSNEAAFNYVRKVLELSGFTGHDSLGIWYSDNQPLDPSMYEELEGCLLLDPDCSGNSGEGGECNHHLLLFDIINEGLLEIFGRSYNYYPRPLSYLSHVHPLPAGENVLYKVWTLISWYLMNSTTYELYPSLDYYVSKDLAKYDGWMNLQFDSECVGLELDDLIFDDLLEEIIST 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01252 923 MobiDBLite consensus disorder prediction 265 302 - -
Gma10g01252 923 MobiDBLite consensus disorder prediction 318 370 - -
Gma10g01252 923 Pfam Protein of unknown function (DUF3741) 220 263 IPR022212 -
Gma10g01252 923 MobiDBLite consensus disorder prediction 425 466 - -
Gma10g01252 923 MobiDBLite consensus disorder prediction 48 81 - -
Gma10g01252 923 MobiDBLite consensus disorder prediction 441 466 - -
Gma10g01252 923 Pfam Domain of unknown function (DUF4378) 756 919 IPR025486 -
Gma10g01252 923 PANTHER PROTEIN TRM32 1 547 IPR044257 -
Gma10g01252 923 PANTHER PROTEIN TRM32 548 923 IPR044257 -
Gma10g01252 923 MobiDBLite consensus disorder prediction 319 370 - -
Gma10g01252 923 PANTHER TRM32-LIKE PROTEIN (DUF3741) 1 547 - -
Gma10g01252 923 PANTHER TRM32-LIKE PROTEIN (DUF3741) 548 923 - -
Gma10g01252 923 MobiDBLite consensus disorder prediction 264 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01252 Gma-Chr10 36934996 36939363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01252 653 913 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 42.697 1.24e-55 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01252 - - gmx:100807303 1844.71