Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01250 AGCTGGTACCAAGAGGTGTCAAAGCTAAAGGCAAAGTATGATTCTCTTCAAAGGACCCAGAGGCATTTGCTTGGGGAAGATCTTGGACCATTGAACATAAAGGAGCTGCAGAATCTTAAGAAACAGCTTGAAAGGGCTTTAGCACAAGCAAGGCAAAGGAAGGCACAAGTGCTTCTGGATAGATATTTGGCTCAATATACTCTAGTCTATATGGCTGCATCGAAATGCAATCGTGTTCCATGGGAAGCAGCCAAACGTATAGGAG 265 0.4415 SWYQEVSKLKAKYDSLQRTQRHLLGEDLGPLNIKELQNLKKQLERALAQARQRKAQVLLDRYLAQYTLVYMAASKCNRVPWEAAKRIG 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01250 88 Pfam K-box region 2 61 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gma10g01250 88 ProSiteProfiles K-box domain profile. 1 82 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gma10g01250 88 PANTHER MADS BOX PROTEIN 3 85 - -
Gma10g01250 88 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL6 ISOFORM X1 3 85 - -
Gma10g01250 88 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01250 Gma-Chr10 36857190 36859423 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01250 1 60 MADS-box Gene Family AT2G45650 63.333 1.23e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01250 K09264 - gmx:100820061 102.064