Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01249 ATGGGTACTCAGGAGAACAACAATTCTCCATTGCATGACCTAAGGGAAGTGGCCAATTCTCAAGAGGAGTCCACAATCTTTGAACAAACACCAAATGGAGACACTGGGGAGAAACCTTCCCCGGAAACTAGCGAAGACTCAAATGCAAAGCGCAGTAACCCTAACAAAGGTGAGGGGAATGAAAATGACCAAGTGAAGGTAGAGGAAGAGTCCAAAGAATGTAATAATCGTAATGCAAATGATGAGAAACAGAGCAAGAGTAACTCAAAACCTCCTGAGCCTCCAAAGGATTACATTCATGTTAGAGCAACAAGAGGTCAAGCCACTGATAGTCATAGTCTTGCAGAAAGAGGCAAGTCAACAATTCCACAACAAGTTACAACATTTCAACTTCAGTATACCCTTAATACTAACTTCTTCAACACCAAAGAACAAAAGGCAGAGAACACCAAGGAGCATAAAGACCTATCCTCAACCTGGACTAATGGATTTGCTTATTGCAATACCATGTCAATGGTTTCAGGGCACGACAACTCTGAAAAGGGAAACTCCGTGGCTTGCGTGGTGGCACGAAGAGACGAGACGCCGGACGCACGACATTGTACTACGCCCTTCGGCCGAGGTCACAGGGGTGCGACAATTGATGAGCAGGCACGTGGTGTGCGAATGGACCTCCATGGCAATTGCGTCCCAGTCCTTGAAGCCATGGCAGTTCACGGTGCATGCTACCAACAACTCCTCCCATGTGCCCCATGCTTCGTTATGGTGTTGCTGTTGTTGGTGGTTTTTCTCTATGTAAGGTTCTGA 807 0.4647 MGTQENNNSPLHDLREVANSQEESTIFEQTPNGDTGEKPSPETSEDSNAKRSNPNKGEGNENDQVKVEEESKECNNRNANDEKQSKSNSKPPEPPKDYIHVRATRGQATDSHSLAERGKSTIPQQVTTFQLQYTLNTNFFNTKEQKAENTKEHKDLSSTWTNGFAYCNTMSMVSGHDNSEKGNSVACVVARRDETPDARHCTTPFGRGHRGATIDEQARGVRMDLHGNCVPVLEAMAVHGACYQQLLPCAPCFVMVLLLLVVFLYVRF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01249 268 PANTHER BHLH TRANSCRIPTION FACTOR 42 117 - -
Gma10g01249 268 PANTHER BHLH TRANSCRIPTION FACTOR 1 42 - -
Gma10g01249 268 Coils Coil 62 82 - -
Gma10g01249 268 MobiDBLite consensus disorder prediction 61 98 - -
Gma10g01249 268 MobiDBLite consensus disorder prediction 1 38 - -
Gma10g01249 268 MobiDBLite consensus disorder prediction 1 98 - -
Gma10g01249 268 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 42 117 IPR024097 GO:0006355
Gma10g01249 268 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 42 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01249 Gma-Chr10 36852481 36854917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01249 3 130 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23690 39.855 1.82e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01249 - - gmx:100812081 183.341