Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01216 ATGGCAACACCACCAACGTCCCCGCCACAATCAGAAAACCCTCCAGAGGTTACTTCAAAAAGGACAAGACAATCCACAAGGCTCAAAAGTCTGACGACTAGATGCTTAGATGGCCCATGGCCAGTTGTGAACGTGAATTCGGCTACAGGTAGAGGGTCAAGGCCTCATAAAGAGAAATTTCACAGTTATTTAGGGGTTGTCGCAAGGGAAAAAGTTCCTATTGTACACGTCAATTGGAATGTTGTCCCCGATGATCTAAAGACCTTAATATGGAAAGATATTTTGGTGGTCGTGGGACCCGATAAGTCACCATCGAAGTCTGTTGGAGAGCCGAACAGGTTCACTTCTGTGGCCACAGATGACCCACTAGGAGAATTGGTTAAGAAGTCATATGTGGTTTACACAAAGCCAATGGAGTTGGCATGGGACGGGGCGAAATTTGGTGCAATGAAGAAAATATGCAGTAATTTCCAAGACAAGGACAATGCACCTCCACCTCCACCTCAATGGATTGAGGCTAAGGTCAGTGTTCGACATGTTCCTGCTTGGGTCCTTCACTCCGCCGCAACCTTCTTATACCTTGGTCCTTCACTCCGCCGCAAGCTTGTCATTGTCTGTGTAGGTCTACATAGGCAGCCACAAGGTTGGTGTTCACTCCAGCGGTCATGCATCTCACACTTTTCAAGTTACATCACTATCAATGAAAACCATGGAAGGGCCCTTTTCTACTGGTTCTTTGAAGCTCAATCTGAACCATCCAAGAAGCCTCTCCTTCTCTGGCTCAATGGAGGACTCGGATGCTCCTCTATTGGGTATGGTGCAGTTGTTGAGATTGGACCTCTTATAGTCAACAAAAATGGGGAAGGACTACATTTCAACACACACTCCTGGATTCGAGAAGCAAATTTGTTATTTGTGGAGTCACCTGTGGGAGTTGGATTTTCATATACTAACACATCTTCTGATCTCACCATATTAGAGGATAATATTGTGGGAGAGGTGGTAGCTATGAAGATGCTTGGACCCAATTCAAAACAAGGGGAGAAAGAATTTCAAACAGAAGTGCTTCTGCTTGGAAGACTGCATCATCGGAATCTTGTAAATTTGTTAGGATACTGCATAAATAAAGGATAG 1134 0.4489 MATPPTSPPQSENPPEVTSKRTRQSTRLKSLTTRCLDGPWPVVNVNSATGRGSRPHKEKFHSYLGVVAREKVPIVHVNWNVVPDDLKTLIWKDILVVVGPDKSPSKSVGEPNRFTSVATDDPLGELVKKSYVVYTKPMELAWDGAKFGAMKKICSNFQDKDNAPPPPPQWIEAKVSVRHVPAWVLHSAATFLYLGPSLRRKLVIVCVGLHRQPQGWCSLQRSCISHFSSYITINENHGRALFYWFFEAQSEPSKKPLLLWLNGGLGCSSIGYGAVVEIGPLIVNKNGEGLHFNTHSWIREANLLFVESPVGVGFSYTNTSSDLTILEDNIVGEVVAMKMLGPNSKQGEKEFQTEVLLLGRLHHRNLVNLLGYCINKG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01216 377 Gene3D alpha/beta hydrolase 219 339 IPR029058 -
Gma10g01216 377 SUPERFAMILY alpha/beta-Hydrolases 226 325 IPR029058 -
Gma10g01216 377 PANTHER CARBOXYPEPTIDASE 221 333 - -
Gma10g01216 377 MobiDBLite consensus disorder prediction 13 28 - -
Gma10g01216 377 SUPERFAMILY Protein kinase-like (PK-like) 329 375 IPR011009 -
Gma10g01216 377 Pfam Serine carboxypeptidase 224 330 IPR001563 GO:0004185|GO:0006508
Gma10g01216 377 MobiDBLite consensus disorder prediction 1 28 - -
Gma10g01216 377 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 221 333 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01216 Gma-Chr10 35494362 35501032 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01216 332 377 Receptor kinase-like Gene Family AT2G37050 56.522 1.51e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Gma10g01216 Peptidase_S10 8.5e-41 CL0028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01216 K16297 - gsj:114381815 242.276