Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01205 ATGAAATTGTCGCTGCAAATTGTTGTTCCAAAGAAGACCAAGTGGATCCAATTTCAAAACTTGGAGGTGGTGACACCAGAGAACCAACCAGAGAAAAAGCACTATCGAGGTGTCAGGCAATGGCCGTGGGGCAAGTTCGTTGTTGAGATCCATGACCCGAACAAGTGCGGGTCTAGGGTTTGGCTCAGAACCTTAGACACCACCATAAAAGCCAATAAGGCCTACAACCAAGTCATCTTTAGGCTCCATGGCTCCAAGGCCAACCTCAACTTCCCCCTTGAAGTTAATGTCGTTGTGGAGACCGTCTTCGTCATCACCGCCGACAGCGAGAGGAAGCATCATCGTGAGGAGGAGGAAGTGGTGGTGGAGGAAGAAAAGGTGGTGGTGAAAAAAGAGAAAATAATGGAGCATGATGTGAGTTTTTTTAGGGAGATTTGTgatttatga 447 0.4676 MKLSLQIVVPKKTKWIQFQNLEVVTPENQPEKKHYRGVRQWPWGKFVVEIHDPNKCGSRVWLRTLDTTIKANKAYNQVIFRLHGSKANLNFPLEVNVVVETVFVITADSERKHHREEEEVVVEEEKVVVKKEKIMEHDVSFFREICDL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01205 148 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Gma10g01205 148 PRINTS Ethylene responsive element binding protein signature 74 94 IPR001471 GO:0003700|GO:0006355
Gma10g01205 148 SUPERFAMILY DNA-binding domain 34 94 IPR016177 GO:0003677
Gma10g01205 148 Pfam AP2 domain 34 84 IPR001471 GO:0003700|GO:0006355
Gma10g01205 148 Gene3D AP2/ERF domain 33 95 IPR036955 GO:0003700|GO:0006355
Gma10g01205 148 SMART rav1_2 34 98 IPR001471 GO:0003700|GO:0006355
Gma10g01205 148 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 2 142 - -
Gma10g01205 148 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 2 142 - -
Gma10g01205 148 CDD AP2 33 92 IPR001471 GO:0003700|GO:0006355
Gma10g01205 148 ProSiteProfiles AP2/ERF domain profile. 34 92 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01205 Gma-Chr10 34924989 34925732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01205 2 147 AP2-EREBP Transcription Factor Family AT5G47230 48.734 3.18e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma10g01205 AP2 2.2e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01205 K09286 - gmx:100800453 167.933