Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01202 ATGAACAGATATCTGCAACAACAGAATCAAATGTGGACTCGGTTGCAGACTCAGTACTTCTCATCCAGCGAGTGGACTCGGTCCCAGAACAAGGTGTTCCCCATGTTCCCGGAGGAGGAAGGGGAGGGTCAGTGGGAGAAAGTTGCTGAGGAGATCATGAAACGCTATCATCAAGCATTGTTTCGTGATACGATCCATACTGAGTCGACTCGGGTTGAGTTGCCAGCTGACTCGGATGACTCGCCGGTGGATGATGCTAGGTCGCCAAAGTCTATTAGGAGAAGAAAAGGGAAATCCTGGAAGCCCTGGACTGAACAAGAACACAGGTTATTTCTTCTTGGACTGAAAATATATGGCAAAGGAGATTGGAAAAACATTTCAAAACATTGTGTCAAGTCAAGAACTCATATTCAAGTAGCTAGTCATGCCCAAAAATATTTCCTTCGCATGAAAGTTACGAAAAAAGAGAGCAAAAGAAAAAGCATTTATGACATAGCATTAAAGGACAAACATACAGAATTGCAGCGATTGCAAGCACAAAATCAAGAACGTGGAATGATGCAGAAGAATTCACTAGATGACTTTGCAATTGAATTTGAAATTTTAGTTGAAGATCCCTCTGTAATTGATGTTGAAATAGCTCACATTGAACTTACCAAGCTACGCGGAGTTAGGAAAGTAGACCTTGGGAAAATAGATTTAGTTCACCATGGAAGGTATGTCATAAACTTCTAA 735 0.415 MNRYLQQQNQMWTRLQTQYFSSSEWTRSQNKVFPMFPEEEGEGQWEKVAEEIMKRYHQALFRDTIHTESTRVELPADSDDSPVDDARSPKSIRRRKGKSWKPWTEQEHRLFLLGLKIYGKGDWKNISKHCVKSRTHIQVASHAQKYFLRMKVTKKESKRKSIYDIALKDKHTELQRLQAQNQERGMMQKNSLDDFAIEFEILVEDPSVIDVEIAHIELTKLRGVRKVDLGKIDLVHHGRYVINF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01202 244 Gene3D - 100 152 - -
Gma10g01202 244 MobiDBLite consensus disorder prediction 71 91 - -
Gma10g01202 244 MobiDBLite consensus disorder prediction 71 99 - -
Gma10g01202 244 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 20 187 IPR043363 -
Gma10g01202 244 SMART sant 99 149 IPR001005 -
Gma10g01202 244 ProSiteProfiles SANT domain profile. 103 155 IPR017884 -
Gma10g01202 244 CDD SANT 102 147 IPR001005 -
Gma10g01202 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 151 IPR017930 -
Gma10g01202 244 ProSiteProfiles Myb-like domain profile. 95 147 IPR001005 -
Gma10g01202 244 SUPERFAMILY Homeodomain-like 98 151 IPR009057 -
Gma10g01202 244 Pfam Myb-like DNA-binding domain 102 147 IPR001005 -
Gma10g01202 244 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 101 149 IPR006447 GO:0003677
Gma10g01202 244 PANTHER SYRINGOLIDE-INDUCED PROTEIN 1-3-1B 20 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01202 Gma-Chr10 34728481 34730651 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma10g01202 Myb_DNA-binding 8.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01202 - - gmx:100776492 468.003