Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01184 GCAGAAGCAAAAATAGTTAAAGGACCACATGAAGATGTGAAGAACTATCTTGAAGCAATTGATCAGCTGAGAAGAAACATTAGATTTTTTGGCAATAAGAAGGGTTTTAAGAATGATGATGGTGTTGTCATCCGTGCCAACAATTTGATAAGCGAAGCTATTTCTAAACTAGAAGATGAATTTAAGCGGCTATTATCGTCTTACAGCAAACCTGTGGAACCTGAGCGCCTCTTTGGTTCTCTTCCAAACTCAATGCGACCTTCATCAGCATCACCAGGTCGTGATGGTGATCCTAATGGAAAGAATCATTCTTCTAATGTCCATTATGAGCTACATAAAAATAATGTCGATGCTCTTATATACACACCTCCTATTCTTATTCCACCAAGAATTTTGCCACTGCTCAATAATTTAACCCAGCAAATGGTTCAAGCTGGTCACCAACAACAGTTGCTCAAAACATACAGAGATACCCGTTCTAAAGTATTGGAAGAAAGCCTTCAAAAGCTTGGTGTTGAGAAACTCAGCAAAGATGATGTTCAAAAGCTACAATGGGAGGTTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATTGCTGTAAGACCACTGTCGAATTTGTTTACATATTTTTTATTTTTTTTTTCATGTAAATATGCTATTGTACTTGAACAGGTCAAATTGTTGTTTGCTGCTGAACGGAAAGTTTGTGATCAGATATTTGAAGGATTTGACTCACTTAGTGATCAGTGTTTTGCTGAAGTAACTACAAACAGTATTTCCATGCTACTTAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCACCTGAAAAGTTATTTGTACTTTTGGACATGTACGAAATATTGCAAGAGATTCATGCAGAGATTGAAATACTCTTTAAAGGCAGAGCTTGCACTAAAATAAGAGAAGCTGTAATGGGTTTGACAAAACAGCTTGCACAAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAAGCAGTTGAGAAAGATGCTACAAAGACTGCAGTAACTGATGGAACTGTCCATCCTTTGACAAGCTATGTGATTAACTATGTGAAGTTTTTATTTGACTATCGATCTACTTTACACCAACTTTTTCAAGGAATTGAAGGTGAAGGTGATTCTTCACAGCTAGCATCTGTGACAATGCGGATATTGCAAGCTCTTCAAACCAATTTAGATGGGAAATCAAAACAGTATAGAGACCCTGCTTTGACACATCTATTTCTCATGAACAATATTCATTATATTGTCAGATCAGTTAGGAGGTCTGAAGCAAAGGACTTGTTGGGGGATGATTGGATACAACGGCATAGGAAGATTGTGCAACAGCATGCCAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTCCCTCTCTATTCAGGGCCTCATCTCATCAAGTGGTGGTGGTAGTAGTAATGCTGGTGGTGATGCGGGCAGTAGTGGTGCTTCAAGAACAATGGTTAAAGACAGGTTCAAGACATTCAATACTATGTTTGAGGAACTTCATCAGAAACAATCTCAGTGGACAGTACCAGATGCAGAGTTGCGAGAGTCTCTTATTCTTGCAGTTGCTGAAGTCTTGCTACCTGCCTATAGATCATTTGTGAAACGTTTTGGGCCACTAGTGGAGAATGTAAAGAGTACTCAGAGGTACATCAAATACACTGCTGAAGATCTAGAGCGAATCTTAGGTGAATTTTTTGAAGGAAAAAGCATGAATGATAACAAGCGGTAA 1776 0.3851 AEAKIVKGPHEDVKNYLEAIDQLRRNIRFFGNKKGFKNDDGVVIRANNLISEAISKLEDEFKRLLSSYSKPVEPERLFGSLPNSMRPSSASPGRDGDPNGKNHSSNVHYELHKNNVDALIYTPPILIPPRILPLLNNLTQQMVQAGHQQQLLKTYRDTRSKVLEESLQKLGVEKLSKDDVQKLQWEVLEAKIGNWIHFMRIAVRPLSNLFTYFLFFFSCKYAIVLEQVKLLFAAERKVCDQIFEGFDSLSDQCFAEVTTNSISMLLSFGEAIAKSKRSPEKLFVLLDMYEILQEIHAEIEILFKGRACTKIREAVMGLTKQLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLHQLFQGIEGEGDSSQLASVTMRILQALQTNLDGKSKQYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWIQRHRKIVQQHANQYKRNAWAKILQSLSIQGLISSSGGGSSNAGGDAGSSGASRTMVKDRFKTFNTMFEELHQKQSQWTVPDAELRESLILAVAEVLLPAYRSFVKRFGPLVENVKSTQRYIKYTAEDLERILGEFFEGKSMNDNKR 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01184 591 Coils Coil 13 33 - -
Gma10g01184 591 Pfam Exo70 exocyst complex subunit 226 578 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma10g01184 591 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 206 IPR004140 GO:0000145|GO:0006887
Gma10g01184 591 PANTHER EXOCYST COMPLEX PROTEIN EXO70 227 587 IPR004140 GO:0000145|GO:0006887
Gma10g01184 591 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 227 587 - -
Gma10g01184 591 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 1 206 - -
Gma10g01184 591 MobiDBLite consensus disorder prediction 76 106 - -
Gma10g01184 591 SUPERFAMILY Cullin repeat-like 2 582 IPR016159 -
Gma10g01184 591 Gene3D Exocyst complex component Exo70 1 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01184 Gma-Chr10 33931577 33947600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01184 1 591 EXO70 exocyst subunit family AT5G03540 66.721 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01184 K07195 - gmx:100775958 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01184 10 33931577 33947600 Gma20g00717 20 27493865 27545995 GST
Gma19g01654 19 45923210 45925066 Gma10g01184 10 33931577 33947600 PCT
Gma03g01608 03 42290109 42291626 Gma10g01184 10 33931577 33947600 PCT