Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01183 ATGATCCAACCACAAAGTGGTGCAAGCACTGTAGTTGATCCTAACACTTTCTCCTTTGTTACTTTCACTCCCGAGAGTTGCACCAATGGTGAGTTGCTTTGCATGGGTTCAGCCACCGCTGGAAATGGGTATTTGAGTCTCACCCCAGAGCCACAACAAAGTGGCAATTTAAGTTTATCATTGTCTAACACAACAAACAGTGTTGGAAGGGTTTTGTACCCTCATCCTGTGAAGGTTTGGCCTGCCATTATCTCCACCACATTCACTGTTAGGATCACTCCCTTTTCGGAAAATTCAACCAACGCTGGTGATGGAATGGCATTAGTGTTTGCACAAGATAATAGGCCCTCACCAAATGGCTCTTATCTTGGCATGTTTGATCAGTCTACACAAGGAGGCGGTTTTCAAAAAATAGCTCTGGAGATGGACACTTTCATGAATGAATTTGATCTAGATGGAAACCACATTGGAATAGTCACAACAAGCATAACAAATCCACTTGCATCTGAGAGTCTCAATAGCTCTGGCATTGACCTCAAAAGTGGAAGAGACATTGAGGTCAGAGTTGACTATGATGGATGGAGTAAAATGATTTTTGTCTCTGTGGGATACACTGAGAGCCAATTGAAGAGTGTCCTTAACCATTCAATTAACCTACCTGACATAGTTCCAAGCTCCATTTATGTAGGATTCACAGCCTCCACAGGCAACAACACTTTTCCTGAAAGCCACCAAGTCCTCAATTGGGTATTCACATCAGTGCCACTGCCTATTCTTTCTGTTGAACTCACTAAAGTTGGCACCATCAAGACCATATTGGTAGTTGTCATGGTATGCTTATTTCCTTGCATTTGGATAGCTGCTTCTTTGAGGAGAACATATGTAAGGGCTAAAAAGAAAGGGGATATAGAAAGCCTAACAAAGAAGGCTGCTGATATCCCCAAGGTGTTCACTTACAAGCAACTATCAAGGGCAACATGCAAATTCAGCCAGGAAAATCTTTTGGGAAAAGGTGCATTTGGTAGTGTTTATAGAGGCATCATATTGGACTCTGGAAAAACTGTAGCAGTAAAGAAGATTTCAGCAACTTCTAAGCAAGGTGAAAGAGAGTTCTTAGCTGAAATATGTACCATAGGGCGTCTTAGGCACAAAAACTTAGTGAAGCTCCAAGGCTGGTGCAGCGAAGGTGAGAATCTTCTCTTGGTTTATGATTACATGCAAAATGGAAGCCTTGATCACTTCATAGGCAAGGGCAGTCTGAACTGGCAAACCAGGCACAAGATATTGACAGGATTGGCATCAGCATTACTTTACCTTCATGAAGAGTGTGGAAACCCTTTTGTTCACAGAGATGTTAAGCCTAACAATGTCATGCTGGACTCTAATCACAATGCTCATTTAGGAGATTTTGGACTAGCAAGGTTACTCAAAAATGAAGGTTCAGTGACTACAAATCTAAATGGAACTCTAGGATATTTGGCTCCTGAACTAAGCTTTACCGGGAGAGCTACACCGGAATCAGATGTGTATAGCTTTGGCATGGTAGTTCTTGAAGTCATATGTGGGAAAAGGTTAAACTGGCTTAAGCAAGGGAATAGTTTTGTAGATTCCGTATGGAATTTGCATGCTCAAAATGCGTTGCTTGAGTGTGTTGACCAACGACTAGAGAACAAATTCGATGAGGAAGAAGCAAAAAGGGCATTGATGGTTGGTTTGGCTTGTTTGCATCCTGATTCCATGTTCAGGCCAAGGATGAGAAAAGCGGTGAACATTTTTCAGAGCCCAAATGAACCTTTAATGGAATTACCTGGAGTGAGGCCTACTGGAGTTTATGTATCAGTTTCTTCTAGTTCATCATTAGCCTCCAACTCTAGCTCTAGAGTGATCATTGTCTATGATTACTTACCAGCAAGGTTTTTGGAGCCTCTGCGAACGAAATTTCAGCTGCATTTGTCCACAATTTTCCAGATTATCAAAGATCGCGACGAAACCACAACCTCGAGTGTGACTGCCATTCACCACCAAGTAGTAAATTGGGGAAGATAA 2046 0.4203 MIQPQSGASTVVDPNTFSFVTFTPESCTNGELLCMGSATAGNGYLSLTPEPQQSGNLSLSLSNTTNSVGRVLYPHPVKVWPAIISTTFTVRITPFSENSTNAGDGMALVFAQDNRPSPNGSYLGMFDQSTQGGGFQKIALEMDTFMNEFDLDGNHIGIVTTSITNPLASESLNSSGIDLKSGRDIEVRVDYDGWSKMIFVSVGYTESQLKSVLNHSINLPDIVPSSIYVGFTASTGNNTFPESHQVLNWVFTSVPLPILSVELTKVGTIKTILVVVMVCLFPCIWIAASLRRTYVRAKKKGDIESLTKKAADIPKVFTYKQLSRATCKFSQENLLGKGAFGSVYRGIILDSGKTVAVKKISATSKQGEREFLAEICTIGRLRHKNLVKLQGWCSEGENLLLVYDYMQNGSLDHFIGKGSLNWQTRHKILTGLASALLYLHEECGNPFVHRDVKPNNVMLDSNHNAHLGDFGLARLLKNEGSVTTNLNGTLGYLAPELSFTGRATPESDVYSFGMVVLEVICGKRLNWLKQGNSFVDSVWNLHAQNALLECVDQRLENKFDEEEAKRALMVGLACLHPDSMFRPRMRKAVNIFQSPNEPLMELPGVRPTGVYVSVSSSSSLASNSSSRVIIVYDYLPARFLEPLRTKFQLHLSTIFQIIKDRDETTTSSVTAIHHQVVNWGR 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01183 681 Gene3D Phosphorylase Kinase; domain 1 288 405 - -
Gma10g01183 681 CDD lectin_legume_LecRK_Arcelin_ConA 17 253 IPR001220 GO:0030246
Gma10g01183 681 CDD STKc_IRAK 335 589 - -
Gma10g01183 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Gma10g01183 681 ProSitePatterns Protein kinases ATP-binding region signature. 335 359 IPR017441 GO:0005524
Gma10g01183 681 Gene3D - 13 260 - -
Gma10g01183 681 Pfam Protein kinase domain 330 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01183 681 PANTHER - 56 256 - -
Gma10g01183 681 PANTHER - 275 613 - -
Gma10g01183 681 SMART serkin_6 329 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01183 681 ProSiteProfiles Protein kinase domain profile. 329 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01183 681 Gene3D Transferase(Phosphotransferase) domain 1 406 599 - -
Gma10g01183 681 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 254 IPR013320 -
Gma10g01183 681 Pfam Legume lectin domain 16 254 IPR001220 GO:0030246
Gma10g01183 681 SUPERFAMILY Protein kinase-like (PK-like) 313 620 IPR011009 -
Gma10g01183 681 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 56 256 - -
Gma10g01183 681 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 275 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01183 Gma-Chr10 33922808 33926275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01183 20 632 Receptor kinase-like Gene Family AT5G55830 37.575 1.19e-117 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gma10g01183 Pkinase 3.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01183 - - gmx:102665030 1337.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01183 10 33922808 33926275 Gma20g00716 20 27485149 27488658 GST