Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01160 ATGATGAAGGAAACAATGACATGCAATGAGAAAAGTGAAGGGTGTTTGATGCTATTTGGTGTGAACATTCTTGCAAAGAACCCTATAAGAGATGGTGTCCCCAAATGTTCAAGTATGCTAAACCGCAGTTATTGCCATGGAGAGGAGGAGATTAATGCCAATAAAGAAAATTCTGAAGGTGGATATTTGTCTGATGTTCTTGTTCAACAACGACATAACTTCCATGACAAGAAAAATAAGGGAAAACCTTGGACTGAGAAAGAACATAAGGATTTCCTAAGTGGTTTAAAGCATCTTGGAAAAGGTAACTGGAAGGAAATCTCAAAGAACTATGTGAGAACAAAGACTCCCACCCAAGTTGCAAGTCATGCACAAAAGTATTTTCTTAGAATTGGTGCTATCGAGACAAGAAAACGTAGAAGAAGCCTCTTTGACATACCATTGGAAGAGGATGGAACTTCAAAAGTTTTCCGAGATTCCCATTAA 486 0.3807 MMKETMTCNEKSEGCLMLFGVNILAKNPIRDGVPKCSSMLNRSYCHGEEEINANKENSEGGYLSDVLVQQRHNFHDKKNKGKPWTEKEHKDFLSGLKHLGKGNWKEISKNYVRTKTPTQVASHAQKYFLRIGAIETRKRRRSLFDIPLEEDGTSKVFRDSH 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01160 161 Gene3D - 82 134 - -
Gma10g01160 161 ProSiteProfiles SANT domain profile. 84 132 IPR017884 -
Gma10g01160 161 SMART sant 80 130 IPR001005 -
Gma10g01160 161 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 80 130 IPR006447 GO:0003677
Gma10g01160 161 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 132 IPR017930 -
Gma10g01160 161 ProSiteProfiles Myb-like domain profile. 76 128 IPR001005 -
Gma10g01160 161 SUPERFAMILY Homeodomain-like 78 131 IPR009057 -
Gma10g01160 161 CDD SANT 83 128 IPR001005 -
Gma10g01160 161 PANTHER TRANSCRIPTION FACTOR KUA1 7 151 - -
Gma10g01160 161 PANTHER TRANSCRIPTION FACTOR KUA1 7 151 - -
Gma10g01160 161 Pfam Myb-like DNA-binding domain 82 128 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01160 Gma-Chr10 32744991 32746331 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma10g01160 Myb_DNA-binding 7.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01160 - - gmx:106794827 328.176