Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01139 ATGCATAGTAGAGAAGAAGATGCCAATAAAAGGAATAGAAGGCTTAGTGTCTTGGTAAGTTGTTTTGTCATCAATGCCTTTGGTGTCAACCTCAACCTCAACCTCATAGCACAAAATGACGTCGTTCTAGTCGAAGTGGGGATGAATGAAATGCAGCAAGAAACAAGGGAGTCGAAGCAGCCTGAGTCAGTAAATGAAATGCGTGTTGTTGGGGGGATGGGAAGAAAAAAGAACCAATACCTTTTCCTCTTGAGATCTGCAAATCAGATTGCAGTTCTTTTTCCCGTTGCAGCTTTTTTTTCGTCTCCAGGGAACCACTGTAACATAGTGGTGTCTTCCTTGAGGAGGTTGAAATTGAGGATCATCTCACTAGTGGAGGAGGCTGATTTGGACATGGGATTTGAGTGGTTTGAGTTTGTGAAAGGGTTTGAAGAGTGCTTGAGGTGTTGTAGGGTTTACTTTGAGGCATTTGATGAGAGTTTTCTATGGACAAGCAATGAGAGGTTGTTGCTGGAGAGGGCAACGGGGAAGGCGGTGGTGGACCTAGTGACATGTTTGACGGTGGAGTTGGTGGAGTTGTGA 582 0.4467 MHSREEDANKRNRRLSVLVSCFVINAFGVNLNLNLIAQNDVVLVEVGMNEMQQETRESKQPESVNEMRVVGGMGRKKNQYLFLLRSANQIAVLFPVAAFFSSPGNHCNIVVSSLRRLKLRIISLVEEADLDMGFEWFEFVKGFEECLRCCRVYFEAFDESFLWTSNERLLLERATGKAVVDLVTCLTVELVEL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01139 193 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 103 192 IPR005202 -
Gma10g01139 193 Pfam GRAS domain family 105 188 IPR005202 -
Gma10g01139 193 PANTHER PROTEIN SHORT-ROOT 103 192 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01139 Gma-Chr10 31807155 31812274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01139 101 192 GRAS Transcription Factor Family AT4G37650 52.577 2.95e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma10g01139 GRAS 1.2e-06 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01139 - - gmx:100820459 103.219