Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01120 ATGACAGAGGTGGATGGAATATGTGACAACCAAGAAGGATTAGCTTGTGAGTACACCAGCCAACCCACTGCTTCCAAAACCAGTAGACCAAACCTCTTGAGTGGACCTCATGTGCCAGCAAAGCGTGATGTTGCAGCTCCTGGCATTAACATCTTGGCATCTTATACAACTATGAAGTCAATTACTGGTCAGAAAGGGGATACCCAATTTTCAGAATTTACACTTATGTCTGGAACTTCTAGGTCATGCCCTCATGTTGCTGGAGTAGTAGCATATGTGAAGTCATTTCACCCGGATTGGAATCCTGCTGCAATCAGATCAGCCATTATTACTACAGTAAAAGTGCAGGAAAATTCTTCAAAGTTGGACTCTAGCATATGGTCAAATGATTTGAAAAGTGGATTCTTCCATGCAGATCCTCATCCAGGAAATATCCTGATTTGTAAAGGACCAGAGGCAAGTCATCAACTATATTGGTTTTGTAATATCTCCTTAACTGTGATTTCATCTCTAGTTTGGAGGATGGAGCTGGACATCCAGATGTTTTTGAATAATGCTGATCAACAACATTTTGAGTTTCAACATTTCCCTTCTTCCTATCTCCAATTGGTTGCACACCGTGTTGCTCAACACTACAACATGCAAAAAATGGTTCAAGATAATGCCTTAGATGGTCAGGGAAGTAAAATTCTGGTGTGGAAGTTACCAGAAACCAAACCTAGGCCCAATAGAAACAGTTTGAATGATGCCAACGGAGTTGGGACGAAAGGAAATCCTGTAAGAAGTGTGGAAGAAAGGAAGGAGGAATATGACCGGGCGCGGGCATGTATCTTTAGTAGCCCTAGAAGCTCTGAATCAGGCGATACCTCATCCATGGTTCCAATGGACGGGAGAAATTCTTCTACTAGCAAGGATGAGAATGAAACTAGCAAGAACCCCATGGCTGATTCAAAAAGATATATCAGTGTCAGGGATAGTTGTTCGACTCGAGTTGCCATAGTCAGAGATAGGGAAAAGGATCATAGTGATCCAGATTATGACCGTAGTTATGGAAGGGGTATCCCAGCCTCTACTGTTAACTTGGTGCCATTTAACTTGCAAAAAGCTCAACCTTTATTTGCTCAATACGATGCTACATTTAACCAGTTGCGTCAGATGTGA 1161 0.4212 MTEVDGICDNQEGLACEYTSQPTASKTSRPNLLSGPHVPAKRDVAAPGINILASYTTMKSITGQKGDTQFSEFTLMSGTSRSCPHVAGVVAYVKSFHPDWNPAAIRSAIITTVKVQENSSKLDSSIWSNDLKSGFFHADPHPGNILICKGPEASHQLYWFCNISLTVISSLVWRMELDIQMFLNNADQQHFEFQHFPSSYLQLVAHRVAQHYNMQKMVQDNALDGQGSKILVWKLPETKPRPNRNSLNDANGVGTKGNPVRSVEERKEEYDRARACIFSSPRSSESGDTSSMVPMDGRNSSTSKDENETSKNPMADSKRYISVRDSCSTRVAIVRDREKDHSDPDYDRSYGRGIPASTVNLVPFNLQKAQPLFAQYDATFNQLRQM 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01120 386 SUPERFAMILY Subtilisin-like 35 115 IPR036852 GO:0004252|GO:0006508
Gma10g01120 386 SUPERFAMILY R3H domain 171 244 IPR036867 GO:0003676
Gma10g01120 386 Gene3D Peptidase S8/S53 domain 40 120 IPR036852 GO:0004252|GO:0006508
Gma10g01120 386 MobiDBLite consensus disorder prediction 19 39 - -
Gma10g01120 386 Pfam SUZ domain 244 280 IPR024771 -
Gma10g01120 386 ProSiteProfiles Serine proteases, subtilase domain profile. 1 135 - -
Gma10g01120 386 MobiDBLite consensus disorder prediction 260 275 - -
Gma10g01120 386 ProSitePatterns Serine proteases, subtilase family, serine active site. 78 88 IPR023828 -
Gma10g01120 386 Gene3D - 169 251 IPR036867 GO:0003676
Gma10g01120 386 Pfam Subtilase family 34 116 IPR000209 GO:0006508|GO:0008236
Gma10g01120 386 PANTHER OS05G0411600 PROTEIN 172 239 - -
Gma10g01120 386 PANTHER OS05G0411600 PROTEIN 239 386 - -
Gma10g01120 386 MobiDBLite consensus disorder prediction 279 300 - -
Gma10g01120 386 CDD R3H_encore_like 171 234 - -
Gma10g01120 386 MobiDBLite consensus disorder prediction 235 317 - -
Gma10g01120 386 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 239 386 - -
Gma10g01120 386 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 172 239 - -
Gma10g01120 386 MobiDBLite consensus disorder prediction 241 255 - -
Gma10g01120 386 Pfam R3H domain 174 221 IPR001374 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01120 Gma-Chr10 31217362 31223819 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01120 41 124 Subtilisin-like Serine Gene Family AT4G00230 64.286 2.17e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01120 - - gmx:100814835 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01120 10 31217362 31223819 Gma02g01813 02 42042852 42050464 GST