Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01112 ATGTCCTATAACGGATTATCACGGAAGGAAGGCTTAGCTGAGGCTTCATCTTGGTTCAAGGAGACAAGATCAGCCTTTATTGTTGCTGCTGCTTCAGTTCCATCTTATCTATTAAATCGACCTGTGAAAATCACACTGGACCGAGATGTGGACATGATGATAACTGGGCAGCGGCATAGTTTTCTAGGGAAGTACAAGGATACTAGCTCAACTTTGTTTGTAAAGGTCAGAGCAAATGGGTCATGGACTTCAGAAGGCCAAGCAGGAGGGTCTAATAGCTCCTCTGATGGAATGGGAAGTGCAAAGGAGAAGCTTGTGATTATTCCTATTGTTCTCATCATGTGTAGGGATTGGATAATACATTGTGACATCAAACTGCAAAATATATTGGTAGACGAAAACTTTTGTCCCAAAGTATCTGATTTTGGGTTGGCCAAATTGATGGGAAGGGAGCACTCTCATGTGGTGACAATGGTTAGAGGCACTAGAGGTTATTTGGCACCAGAATGGGTTAGTAATCACCCTATAACTGTAAAAGCTGACGTTTACAACTATGGAATGCTTCTTTTAGAGATCATTGGTGGCAGGAGAAATCTTGACATGTCCTTTGGTGCTGAGGACTTTTTCTATCCTGGTTCGGCTTACAAGGTACATTAA 657 0.4216 MSYNGLSRKEGLAEASSWFKETRSAFIVAAASVPSYLLNRPVKITLDRDVDMMITGQRHSFLGKYKDTSSTLFVKVRANGSWTSEGQAGGSNSSSDGMGSAKEKLVIIPIVLIMCRDWIIHCDIKLQNILVDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLAPEWVSNHPITVKADVYNYGMLLLEIIGGRRNLDMSFGAEDFFYPGSAYKVH 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01112 218 SUPERFAMILY Protein kinase-like (PK-like) 115 203 IPR011009 -
Gma10g01112 218 Gene3D Transferase(Phosphotransferase) domain 1 111 211 - -
Gma10g01112 218 PANTHER OS07G0415500 PROTEIN 60 114 - -
Gma10g01112 218 PANTHER OS07G0415500 PROTEIN 115 216 - -
Gma10g01112 218 Gene3D Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 56 66 - -
Gma10g01112 218 ProSiteProfiles Protein kinase domain profile. 1 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01112 218 Gene3D Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 20 55 - -
Gma10g01112 218 Pfam Molybdopterin cofactor-binding domain 20 66 IPR008274 GO:0016491
Gma10g01112 218 SMART serkin_6 20 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01112 218 Pfam Protein kinase domain 118 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01112 218 SUPERFAMILY Molybdenum cofactor-binding domain 20 66 IPR037165 GO:0016491
Gma10g01112 218 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Gma10g01112 218 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 60 114 - -
Gma10g01112 218 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 115 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01112 Gma-Chr10 30977873 30980823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01112 115 199 Receptor kinase-like Gene Family AT5G20050 60.000 3.45e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma10g01112 Pkinase 1.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01112 - - gmx:102670544 344.739