Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01100 ATGCAAGAAAATTTGAAGAAACTGAAAGAGGTGAATAGGAATCTTCGTAAGGAGATTAGGCAGAGAATGGGAGATTGTATGAATGATCTAGGCTTAGAAGATCTCAAGCTCCTTGAGGAAGAAATGGACAAGGCTGCCAAGGTTGTTCGTGAGTGTAAGGCAACGAAATTTAATGATGTTAAATCAAGCAAAGGCTCTCCATACTGGATGGCCCTTGAGGTTTCTAACTTAAAGAACCAAGGTGGTTATGGGCTAGCAGTTGATATATGGAGCTTAGGGTGTACAGTTTTGGAGATGTTGACAAGGCAGCCTCCTTATTCTGAGTTGGAAGGAGTGCTGCCTCCTATAGCACAAAAGCACGTGATTCAACTCATACTTTCTCACGAAAGAAACTTCAGGGCTGATGAGCTAATGGAGTTCTACAAACCATCACTTTGGAGACAGAATATATTTATTGAATGTACTGCAACTGATCTGACAAAAGTGAAAGTTGTTTTGAATACAATGGTAATAGCCTTCTCAGAATATTGTGAAAACAAATTTGTCATTGAACCAGTTGAAGTTATTTTTTCTGATGGTAACTCAAACATATACCCTGATTTATCTGTCTACAATATGGAAGTTTCTCTATCTTACATTACTGGATTGATTGGGGTATCATTGGAAGCAGAAGAGGTAATTATTTTGCTGCTTCATATGAGTGGCGTGATCCTGCACTTGCAAATTGACTATTGA 735 0.3864 MQENLKKLKEVNRNLRKEIRQRMGDCMNDLGLEDLKLLEEEMDKAAKVVRECKATKFNDVKSSKGSPYWMALEVSNLKNQGGYGLAVDIWSLGCTVLEMLTRQPPYSELEGVLPPIAQKHVIQLILSHERNFRADELMEFYKPSLWRQNIFIECTATDLTKVKVVLNTMVIAFSEYCENKFVIEPVEVIFSDGNSNIYPDLSVYNMEVSLSYITGLIGVSLEAEEVIILLLHMSGVILHLQIDY 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01100 244 ProSiteProfiles K-box domain profile. 1 103 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gma10g01100 244 Coils Coil 1 25 - -
Gma10g01100 244 Pfam K-box region 1 58 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gma10g01100 244 Coils Coil 35 55 - -
Gma10g01100 244 ProSiteProfiles Protein kinase domain profile. 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01100 244 Gene3D Transferase(Phosphotransferase) domain 1 25 129 - -
Gma10g01100 244 Gene3D - 139 202 IPR020825 -
Gma10g01100 244 Pfam Protein kinase domain 54 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01100 244 SUPERFAMILY Protein kinase-like (PK-like) 60 173 IPR011009 -
Gma10g01100 244 PANTHER PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 148 234 IPR045060 GO:0004826|GO:0006432
Gma10g01100 244 PANTHER PHENYLALANINE--TRNA LIGASE BETA SUBUNIT 148 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01100 Gma-Chr10 30054320 30059178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01100 52 112 MAP Kinase Kinase Kinase AT4G08500 65.574 9.62e-21 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma10g01100 Pkinase 4.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01100 K01890 - gmx:100805249 155.992