Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01081 ATGCAGAGACTAAAAACCAAGGACACTCCAAGCTTCAATTCCTATGCATTGTATGCATATGAAACTGTTTGGTTAGTAGCCCGGGCTCTTGATGCTTTTGTCAAAAAAGGTGGTGTTGTGTCTTTCTCCTTTGACCCTACGTTGCTCGAAACAAATGGAAGCATGTTGCATTTACATTTGCTTCGTGTTTTTGATGATGGCCCTTTGTTTCTTGAGACAATTTTGAGCACCAATTTCTCTGGTCTAACTGGAACAGCTCACTTTGATATTGAAAGGAATAGAAATCATCCAGCATATGATATGTTGAATATTGGAAGATCTGGAATGCGCAAAATTGGTTATTGGTCTAATTACTCAGGTCTCTCAGTTGTGACTCCAGAAATTTTGTATAAGAAACCAGTTAACACTTCAACAAGCAGCCAGCAACTGTATGGTGTTATATGGCCTGGAGAAACTGCAGCTAAACCAAGAGGTTGGGTGTTCCCCAACAATGGAAAGCCACTGATAATAGCAGTTCCTAACCGAGTAAGCTACAAGGAGTTTGTTTCTAATGACAATAACCCTCCTGGAGTAACAGGCTATTGCATTTTCTTGGAAGCTGCCATAAACTTGGTGCCTTATCCTGTCCCACGAGAATATATATTATTTCGACCTGGTAATAGAAATCCTAGCTATGATGACCTTGCAAGTCAGGTTGCACTAAATAATAGTGATGAACCTGATTTGGCAGAAGCAGAACTGGATGACAGTCTTTGCCTCCTTGCTTTTTCAGCTTTTTCCAAGTGGATATGGGGTGGCTCAGATCCTCGTTACATGTCCAATGTAGCCACTGATTGGGATGACATATTGAAAATTATAGAGAAGCTGATAGGGGAAGATGAAGTTGAAGGAGTTGGGCTTGTAAATTTCAACAAGACTGAACTAGCACAATGGGAGCATCTTATTCCTGAGGCAACACATGTTGTTCTGCCTCTGGAGTATGCTGCAAGAAATGTGACATGGGAGTCCTTGTACCCGCAATGGATCGATGAGGAAGAAGAAACCCAAGTTCCCGTTTGTCCTTCTCTGCCAAGTCTAAGGTCCCCTGGCATAAGACCTAACCTCATTTACTGTGAAGCTTCCTTGTAG 1128 0.4193 MQRLKTKDTPSFNSYALYAYETVWLVARALDAFVKKGGVVSFSFDPTLLETNGSMLHLHLLRVFDDGPLFLETILSTNFSGLTGTAHFDIERNRNHPAYDMLNIGRSGMRKIGYWSNYSGLSVVTPEILYKKPVNTSTSSQQLYGVIWPGETAAKPRGWVFPNNGKPLIIAVPNRVSYKEFVSNDNNPPGVTGYCIFLEAAINLVPYPVPREYILFRPGNRNPSYDDLASQVALNNSDEPDLAEAELDDSLCLLAFSAFSKWIWGGSDPRYMSNVATDWDDILKIIEKLIGEDEVEGVGLVNFNKTELAQWEHLIPEATHVVLPLEYAARNVTWESLYPQWIDEEEETQVPVCPSLPSLRSPGIRPNLIYCEASL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01081 375 SUPERFAMILY Periplasmic binding protein-like I 11 160 IPR028082 -
Gma10g01081 375 Gene3D - 10 121 - -
Gma10g01081 375 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 3 236 - -
Gma10g01081 375 Coils Coil 373 375 - -
Gma10g01081 375 Pfam Receptor family ligand binding region 11 104 IPR001828 -
Gma10g01081 375 PANTHER GLUTAMATE RECEPTOR 3.4 3 236 - -
Gma10g01081 375 Gene3D - 12 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01081 Gma-Chr10 28740359 28748299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01081 12 238 Ion Channels AT1G05200 59.211 2.06e-89 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01081 K05387 - gmx:100783715 431.409