Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01080 ATGAGAGGAAAAGAAACAGAGTTGGTTTACAACGGGAATGCTCCCAGAGAAGCATATGCAACAATTCTGCATTCAGCTCATGTTTACGTTTGTGGGGCTATAGCTGTGGCACAAAGCATCCGCAAGTCTGGATCAACTCGAGACCTTGTAATACTTGTTGATGAGACAATCAGCAGCTATCACAGAAGTGGTCTGGAAGCAGCAGGTTGGAAGATGAATGATGGGTGCCATTGCAGAAAATATGGGCAGAAAATGGGCAAAGGAAATCCATGCCCCCGAGCTTACTATCGATGTACTGCTTCTCCATCTTGTCCAGTAAGAAAACAGGTGCAAAGATGTGCTGAAGACATGTCCATATTGATTACCACCTATGAAGGAACTCACAATAACCCGCTTCCTATGTCAGCCACTGCAATGGCCTGCAAAACTTTTGCTACAGCTTCCATGCTCCAATCTCCCTCATTGAGTTCACAACATGGATTAGTTGATTCAGCTATATCCTCCATCATCAACTCTAGTGCTCCTTATTACAACCCTAATAATGCTCTAAACTTCTCTACACACCAAGTTTCAAGACGACAACAATTCTACTTCCCCAACTCATCCATTTCAACCTTGAATTCTCACCCCACAATCACTTTAGACCTTACAACACCTCCAACTTCTTCCTCAAATTCAAGCTTCACTTGCATGCCAAAATATTCATCAACAAACCTTAACTTTTCCTCAGGTTTCTCTCCTCTACATTCTAGCATGCCGCAATCACCTTGGAACAGGTATAGTGGTTACTCCAACTCTGGAACACTTTATCAAAATAGACACCAAGGTGGTAATTACATGTTAAACACGGGAAATCAAAATCAGCCACATTCTGTAGGGCATCTCCATCAACCTATTTACATGAGCAACAATAGTACCATTTCTCAGCATTCTTTCCCTAATCCCATTGTTGCTGCAACTGAGGCAATAATCAGAAGCAACCCAAAATTTCAATCAGCACTAGCAATTGCTCTCACAACATATGTTGGCAATGAAGCTAGTAGTGGTAGGACAAGAGAAAATCATGTTCTTGAGAGTGCAGAACTGATGAAGTTAAAGCTGCTACGTAGTGAAAATAGTATAGGAAACTCAAGTATATTTCCACTACCACTACCGGAGCAAAGGAAGTGA 1170 0.4188 MRGKETELVYNGNAPREAYATILHSAHVYVCGAIAVAQSIRKSGSTRDLVILVDETISSYHRSGLEAAGWKMNDGCHCRKYGQKMGKGNPCPRAYYRCTASPSCPVRKQVQRCAEDMSILITTYEGTHNNPLPMSATAMACKTFATASMLQSPSLSSQHGLVDSAISSIINSSAPYYNPNNALNFSTHQVSRRQQFYFPNSSISTLNSHPTITLDLTTPPTSSSNSSFTCMPKYSSTNLNFSSGFSPLHSSMPQSPWNRYSGYSNSGTLYQNRHQGGNYMLNTGNQNQPHSVGHLHQPIYMSNNSTISQHSFPNPIVAATEAIIRSNPKFQSALAIALTTYVGNEASSGRTRENHVLESAELMKLKLLRSENSIGNSSIFPLPLPEQRK 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01080 389 PANTHER WRKY TRANSCRIPTION FACTOR 72B 71 389 - -
Gma10g01080 389 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 71 389 IPR044810 GO:0003700
Gma10g01080 389 Pfam WRKY DNA -binding domain 73 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma10g01080 389 Gene3D WRKY domain 65 134 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma10g01080 389 ProSiteProfiles WRKY domain profile. 67 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma10g01080 389 SUPERFAMILY WRKY DNA-binding domain 71 133 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma10g01080 389 SUPERFAMILY Nucleotide-diphospho-sugar transferases 16 73 IPR029044 -
Gma10g01080 389 SMART WRKY_cls 72 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01080 Gma-Chr10 28735804 28740105 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01080 72 345 WRKY Transcription Factor Family AT1G18860 41.748 1.88e-39 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma10g01080 WRKY 4.6e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01080 - - gsj:114371585 585.489