LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma10g01061	ATGGTGGTGAGAGAACCGGAACGTAAAATTGTTCAACTTGAACAAGATAATAAGGAATTGGGAGATTTACTTAAAGAACTCAGGGAAGCTCAGATCAATAATGGTGGAGCAAATTCGGTGACATCAAAGCTCCGCAACAAGCTTAGACGGTTGGAAGAGaagacttctggtgctgagggggagcgtttaaaagaagcagctaacatcaataaatcattatctaccttgggtcatgttattatgatactagtggatgtggcaaatgggaagcagaggcatatcccttacagagactctagactaacttttcttcttcaggactctcttggcggaaactcgaaaacaatgatcattgccaatgtcagcccttctatctgctgcgctgctgaaacattgaatacacttaaatttgctcagagagaaaaacttattcaaaataatgAAGAGCTTTCTATCCTCAAACGATGTCAGAATGTCTCTAGGTCTTTGTCATCGATCAGAGATATAAAACAATCACTAGAACTCGAAGACTGTTGCCTAGAAAATGCAACTGACATGGTTGACCAACATGAAGATAACATGCCGGATTATGAATCCAAGGGTATACATGGGTAG	615	0.2195	MVVREPERKIVQLEQDNKELGDLLKELREAQINNGGANSVTSKLRNKLRRLEEKTSGAEGERLKEAANINKSLSTLGHVIMILVDVANGKQRHIPYRDSRLTFLLQDSLGGNSKTMIIANVSPSICCAAETLNTLKFAQREKLIQNNEELSILKRCQNVSRSLSSIRDIKQSLELEDCCLENATDMVDQHEDNMPDYESKGIHG	204

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma10g01061	204	Coils	Coil	41	61	-	-
	Gma10g01061	204	Coils	Coil	10	33	-	-
	Gma10g01061	204	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	54	147	IPR027417	-
	Gma10g01061	204	SMART	kinesin_4	2	152	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Gma10g01061	204	Coils	Coil	180	200	-	-
	Gma10g01061	204	Pfam	Kinesin motor domain	54	144	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Gma10g01061	204	Gene3D	Kinesin motor domain	13	152	IPR036961	-
	Gma10g01061	204	PANTHER	KINESIN-LIKE PROTEIN KIN-12F ISOFORM X1	54	201	-	-
	Gma10g01061	204	ProSiteProfiles	Kinesin motor domain profile.	54	144	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Gma10g01061	204	PANTHER	KINESIN-LIKE PROTEIN KIF11	54	201	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma10g01061	Gma-Chr10	28225576	28227335	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma10g01061	54	147	Calmodulin-binding Proteins	AT5G65930	52.128	4.50e-21	89.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma10g01061	K10400		-	gmx:100809655	270.396