Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01027 ATGGTAACCTTTGTTGTGTCCAATGCTGGTGATTGTCATGCTGTGATTAGCAAAGAGGGTATGGCTGAAGTCCTAACATCTGATCACAAGCCTTCTAGGGAAGATGAAAGGGACAAAATTGAGACTCGGAACTATGGATCAAATGACAATGATGAAACCTTAGATCATTTTGTGCATACCCAGGTGAGCATAGCAAAGAAAGTAGTGAAAGTTGAAGTGCGTCTCATAATTTATGATATCAGAAAAAAGTGGCAATGGTCATGA 264 0.3977 MVTFVVSNAGDCHAVISKEGMAEVLTSDHKPSREDERDKIETRNYGSNDNDETLDHFVHTQVSIAKKVVKVEVRLIIYDIRKKWQWS 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01027 87 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 3 44 - -
Gma10g01027 87 MobiDBLite consensus disorder prediction 25 47 - -
Gma10g01027 87 PANTHER PROTEIN PHOSPHATASE 2C 3 44 IPR015655 GO:0004722|GO:0006470
Gma10g01027 87 Gene3D - 2 65 IPR036457 -
Gma10g01027 87 SUPERFAMILY PP2C-like 4 44 IPR036457 -
Gma10g01027 87 Pfam Protein phosphatase 2C 4 44 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01027 Gma-Chr10 27214868 27215466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01027 4 42 PP2C-type Phosphatase Gene Family AT1G07160 66.667 1.64e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01027 K17506 - nnu:104602565 68.9366