Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01023 ATGGAATATGCATCTGGTGGAGAACTATTTGAGAAAATCTGCAATGCAGGACATTTTAATGAGGGTGAGGCTCGTTTCTTTTTTCACCAACTCATATCGGGGGTCAGCTATTGTCATGCAATGGAAGTGTGTCACCGGGACCTGAAGTTGGAAAACACTTTGTTGGATGGAAGCTTGACACTTCATTTTAATATATGTGATTTTGGATACTCCAAGATGGGAACGTTCCTCTTGACTCTTGAGATTGCAGATGTCTGGTCATGTGGAGTAACCTTGTTTGTGATGCTAGTGGGATCATATCCTTTTGAAGATCCTAATGATCCAAAGGATTTCCGAAAGACAATTCAG 348 0.4109 MEYASGGELFEKICNAGHFNEGEARFFFHQLISGVSYCHAMEVCHRDLKLENTLLDGSLTLHFNICDFGYSKMGTFLLTLEIADVWSCGVTLFVMLVGSYPFEDPNDPKDFRKTIQ 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01023 116 PANTHER SERINE/THREONINE KINASE 1 114 - -
Gma10g01023 116 SMART serkin_6 1 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01023 116 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 1 114 - -
Gma10g01023 116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Gma10g01023 116 Gene3D Transferase(Phosphotransferase) domain 1 4 112 - -
Gma10g01023 116 Pfam Protein kinase domain 1 72 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01023 116 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01023 116 SUPERFAMILY Protein kinase-like (PK-like) 1 112 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01023 Gma-Chr10 27136823 27140071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01023 1 113 CBL-interacting serine-threonine protein kinases AT4G24400 41.176 5.60e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gma10g01023 Pkinase 4.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01023 K14498 - gmx:100788440 202.986