Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma10g01019 | ATGTTTGTTTGGGAAGCACTGCATGACTTAACACTAATGATTCTCATGGTTTGTGCTATAGTTTCTATAGCTATAGGGCTTCCCACTGAAGGGTGGCCAAAAGGTGTTTATGATGGTCTGGGAATCATACTTAGTATATTCTTGGTGGTCATTGTTACTGCCATCAGTGACTACCAGCAATCCCTGCAGTTCAGGGATTTAGACAAAGAAAAGAAAAAGATCTTTGTTCAGGTCACGAGAGACAGAAAAAGACAGAAGGTCTCAATTTATGATTTGGTTGTGGGAGATATTGTTCATTTGTCAACCGGTGATCAAGTTCCAGCTGATGGAATTTATATATCAGGGTATTCTTTGGTAATTGATGAGTCAAGTTTGACAGGTGAGAGCGAGCCCGTAAATATAGATGAAGAAAGACCTTTTCTTCTTTCAGGAACCAAAGTACAAGATGGTCAGGGGAAGATGATAGTTACAACTGTTGGCATGAGGACCGAATGGGGAAAGTTGATGGAAACTCTAAGTGAGGGAGGAGAGGATGAGACTCCACTGCAGGTGAAATTGAATGGAGTTGCTACAGTTATTGGTAAAATTGGTTTGACTTTTTCTGTGCTGACATTTGTGGTGTTGACAATAAGGTTTGTTGTTGAAAAAGCAGTTCGTGGGGAGTTTGCTAGTTGGTCTTCAAATGATGCATTGAAGCTGCTGGACTACTTTGCTATTGCGGTAACCATAATAGTTGTTGCAATTCCTGAAGGATTGCCATTAGCTGTGACACTAAGTCTTGCTTTTGCGATGAAAAAGTTAATGAAGGATAAAGCACTTGTGAGACATCTTTCTGCCTGCGAGACTATGGGCTCGGCGACCTGCATCTGCACAGATAAAACAGGAACATTGACCACTAACCATATGGTGGTTAATAAAATTTGGATATGTGGAAAGATCAATGAGATTAAAGGCAATGAGAGTATTGACAAACTGAAGACAGAGATATCTGAAGAAGTTTTAAGCATCCTTTTGCGGTCTATATTTCAAAATACTTCTTCCGAAGTTGTTAAGGACAAAGATGGAAAAACGACAATACTAGGAACACCAACAGAATCAGCATTATTGGAATTTGGCTTGCTTGCAGGTGGTGATTTTGAAGCGCAGCGTGGAACATATAAGATACTTAAGGTTGTGCCTTTCAATTCAGTCCGGAAGAAGATGTCTGTGCTAGTAGGTCTTCCTGATGGAGGTGTCCAAGCTTTCTGCAAAGGTGCATCAGAAATAGTATTAAAATTGTGTAACAAAGTTATTGATCCAAATGGAACAGCTGTTGATCTTTCTGATGAGCAGGCAAAGAAAGTCTCTGACATTATAAATGGATTTGCCAATGAAGCTTTGAGAACTCTTTGTTTAGCTCTCAAAGATGTAAATGGAACCCAAGGAGAAAGCAGCATCCCTGAAGATAGCTATACTCTGATAGCCATTGTGGGAATCAAGGATCCTGTGCGCCCTGGGGTTAGGGAAGCTGTTAAAACTTGTTTAGCTGCTGGAATAACTGTCCGCATGGTAACTGGTGATAACATAAATACGGCTAGGGCTATAGCTAGAGAATGTGGCATTCTTACAGAGGATGGTGTGGCCATAGAAGGACCCCACTTTCGGGACTTGTCTACAGAGCAAATGAAGAGTATTATACCAAGAATTCAGGTTATGGCGCGATCCTTACCTCTTGACAAGCATACCTTGGTAACCCGTTTGAGGAATATGTTTGGTGAGGTTGTAGCTGTTACTGGTGATGGAACCAATGATGCTCCTGCACTGCATGAGTCAGACATTGGGCTTGCTATGGGCATAGCTGGAACAGAGGTTGCCAAAGAAAATGCTGATGTCATTATAATGGATGATAACTTCACTACTATTGTCAATGTGGCCAGATGGGGACGGGCCATATACATAAACATTCAAAAATTTGTGCAGTTTCAGTTAACAGTCAATATTGTTGCTCTGATTATTAACTTTGTTTCTGCATGCATCACAGGATCTGCTCCCCTCACAGCTGTTCAGTTGCTTTGGGTCAACTTGATTATGGACACTCTGGGTGCATTGGCTTTGGCCACTGAACCTCCCAATGATGGACTTATGCTAAGACCCCCAGTTGGAAGGACAACAAATTTTATCACCAAACCCATGTGGAGGAATATTTTTGGTCAAAGTTTATATCAACTAATTGTCCTTGCGGTCCTCACTTTTGATGGGAAGAGGCTACTGAGAATTAATGGTCCAGATGCGACTATAGTGCTCAACACTTTGATATTCAACTCCTTTGTATTTTGCCAGGTTTTCAATGAGATAAACAGCCGAGAAATCGAAAAGATAAACATATTCAAAGGCATGTTTGAGAGCTGGATATTTTTCACGGTGATATTCTCCACAGTGGTGTTTCAAGTACTCATAGTTGAGTTCCTGGGAACATTTGCCAGCACAGTGCCTCTAAGCTGGCAATTCTGGGTGCTCAGCGTTGTAATAGGAGCATTTAGCATGCCTATATCTGTCATACTCAAGTGCATTCCAGTTGAAAGAGGAGGTATTACAACGCACCATGATGGTTATGAGGCACTACCTTCTGGTCCCGAGCTAGCATAA | 2625 | 0.4145 | MFVWEALHDLTLMILMVCAIVSIAIGLPTEGWPKGVYDGLGIILSIFLVVIVTAISDYQQSLQFRDLDKEKKKIFVQVTRDRKRQKVSIYDLVVGDIVHLSTGDQVPADGIYISGYSLVIDESSLTGESEPVNIDEERPFLLSGTKVQDGQGKMIVTTVGMRTEWGKLMETLSEGGEDETPLQVKLNGVATVIGKIGLTFSVLTFVVLTIRFVVEKAVRGEFASWSSNDALKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMKDKALVRHLSACETMGSATCICTDKTGTLTTNHMVVNKIWICGKINEIKGNESIDKLKTEISEEVLSILLRSIFQNTSSEVVKDKDGKTTILGTPTESALLEFGLLAGGDFEAQRGTYKILKVVPFNSVRKKMSVLVGLPDGGVQAFCKGASEIVLKLCNKVIDPNGTAVDLSDEQAKKVSDIINGFANEALRTLCLALKDVNGTQGESSIPEDSYTLIAIVGIKDPVRPGVREAVKTCLAAGITVRMVTGDNINTARAIARECGILTEDGVAIEGPHFRDLSTEQMKSIIPRIQVMARSLPLDKHTLVTRLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFTTIVNVARWGRAIYINIQKFVQFQLTVNIVALIINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMLRPPVGRTTNFITKPMWRNIFGQSLYQLIVLAVLTFDGKRLLRINGPDATIVLNTLIFNSFVFCQVFNEINSREIEKINIFKGMFESWIFFTVIFSTVVFQVLIVEFLGTFASTVPLSWQFWVLSVVIGAFSMPISVILKCIPVERGGITTHHDGYEALPSGPELA | 874 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma10g01019 | 874 | SUPERFAMILY | Calcium ATPase, transduction domain A | 75 | 171 | IPR008250 | - | |
| Gma10g01019 | 874 | Gene3D | - | 609 | 852 | - | - | |
| Gma10g01019 | 874 | Gene3D | - | 155 | 302 | - | - | |
| Gma10g01019 | 874 | Gene3D | - | 303 | 493 | IPR023299 | GO:0000166 | |
| Gma10g01019 | 874 | CDD | P-type_ATPase_Ca_PMCA-like | 2 | 724 | - | - | |
| Gma10g01019 | 874 | PRINTS | H+-transporting ATPase (proton pump) signature | 448 | 466 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Gma10g01019 | 874 | PRINTS | H+-transporting ATPase (proton pump) signature | 591 | 607 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Gma10g01019 | 874 | PRINTS | H+-transporting ATPase (proton pump) signature | 623 | 648 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Gma10g01019 | 874 | SUPERFAMILY | HAD-like | 289 | 696 | IPR036412 | - | |
| Gma10g01019 | 874 | Pfam | E1-E2 ATPase | 75 | 269 | - | - |
Showing 1 to 10 of 30 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma10g01019 | K01537 | - | gmx:100785768 | 1691.01 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma10g01019 | 10 | 26991708 | 26996238 | Gma10g01019 | 10 | 26991708 | 26996238 | ECH | |
| Gma10g01019 | 10 | 26991708 | 26996238 | Gma02g01751 | 02 | 39071432 | 39083184 | GST | |
| Gma19g01294 | 19 | 42133406 | 42144133 | Gma10g01019 | 10 | 26991708 | 26996238 | PCT | |
| Gma03g01245 | 03 | 38365039 | 38377734 | Gma10g01019 | 10 | 26991708 | 26996238 | PCT | |
| Gma10g01019 | 10 | 26991708 | 26996238 | Gma19g01294 | 19 | 42133406 | 42144133 | PCT | |
| Gma10g01019 | 10 | 26991708 | 26996238 | Gma03g01245 | 03 | 38365039 | 38377734 | PCT |
Showing 1 to 6 of 6 entries