Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01019 ATGTTTGTTTGGGAAGCACTGCATGACTTAACACTAATGATTCTCATGGTTTGTGCTATAGTTTCTATAGCTATAGGGCTTCCCACTGAAGGGTGGCCAAAAGGTGTTTATGATGGTCTGGGAATCATACTTAGTATATTCTTGGTGGTCATTGTTACTGCCATCAGTGACTACCAGCAATCCCTGCAGTTCAGGGATTTAGACAAAGAAAAGAAAAAGATCTTTGTTCAGGTCACGAGAGACAGAAAAAGACAGAAGGTCTCAATTTATGATTTGGTTGTGGGAGATATTGTTCATTTGTCAACCGGTGATCAAGTTCCAGCTGATGGAATTTATATATCAGGGTATTCTTTGGTAATTGATGAGTCAAGTTTGACAGGTGAGAGCGAGCCCGTAAATATAGATGAAGAAAGACCTTTTCTTCTTTCAGGAACCAAAGTACAAGATGGTCAGGGGAAGATGATAGTTACAACTGTTGGCATGAGGACCGAATGGGGAAAGTTGATGGAAACTCTAAGTGAGGGAGGAGAGGATGAGACTCCACTGCAGGTGAAATTGAATGGAGTTGCTACAGTTATTGGTAAAATTGGTTTGACTTTTTCTGTGCTGACATTTGTGGTGTTGACAATAAGGTTTGTTGTTGAAAAAGCAGTTCGTGGGGAGTTTGCTAGTTGGTCTTCAAATGATGCATTGAAGCTGCTGGACTACTTTGCTATTGCGGTAACCATAATAGTTGTTGCAATTCCTGAAGGATTGCCATTAGCTGTGACACTAAGTCTTGCTTTTGCGATGAAAAAGTTAATGAAGGATAAAGCACTTGTGAGACATCTTTCTGCCTGCGAGACTATGGGCTCGGCGACCTGCATCTGCACAGATAAAACAGGAACATTGACCACTAACCATATGGTGGTTAATAAAATTTGGATATGTGGAAAGATCAATGAGATTAAAGGCAATGAGAGTATTGACAAACTGAAGACAGAGATATCTGAAGAAGTTTTAAGCATCCTTTTGCGGTCTATATTTCAAAATACTTCTTCCGAAGTTGTTAAGGACAAAGATGGAAAAACGACAATACTAGGAACACCAACAGAATCAGCATTATTGGAATTTGGCTTGCTTGCAGGTGGTGATTTTGAAGCGCAGCGTGGAACATATAAGATACTTAAGGTTGTGCCTTTCAATTCAGTCCGGAAGAAGATGTCTGTGCTAGTAGGTCTTCCTGATGGAGGTGTCCAAGCTTTCTGCAAAGGTGCATCAGAAATAGTATTAAAATTGTGTAACAAAGTTATTGATCCAAATGGAACAGCTGTTGATCTTTCTGATGAGCAGGCAAAGAAAGTCTCTGACATTATAAATGGATTTGCCAATGAAGCTTTGAGAACTCTTTGTTTAGCTCTCAAAGATGTAAATGGAACCCAAGGAGAAAGCAGCATCCCTGAAGATAGCTATACTCTGATAGCCATTGTGGGAATCAAGGATCCTGTGCGCCCTGGGGTTAGGGAAGCTGTTAAAACTTGTTTAGCTGCTGGAATAACTGTCCGCATGGTAACTGGTGATAACATAAATACGGCTAGGGCTATAGCTAGAGAATGTGGCATTCTTACAGAGGATGGTGTGGCCATAGAAGGACCCCACTTTCGGGACTTGTCTACAGAGCAAATGAAGAGTATTATACCAAGAATTCAGGTTATGGCGCGATCCTTACCTCTTGACAAGCATACCTTGGTAACCCGTTTGAGGAATATGTTTGGTGAGGTTGTAGCTGTTACTGGTGATGGAACCAATGATGCTCCTGCACTGCATGAGTCAGACATTGGGCTTGCTATGGGCATAGCTGGAACAGAGGTTGCCAAAGAAAATGCTGATGTCATTATAATGGATGATAACTTCACTACTATTGTCAATGTGGCCAGATGGGGACGGGCCATATACATAAACATTCAAAAATTTGTGCAGTTTCAGTTAACAGTCAATATTGTTGCTCTGATTATTAACTTTGTTTCTGCATGCATCACAGGATCTGCTCCCCTCACAGCTGTTCAGTTGCTTTGGGTCAACTTGATTATGGACACTCTGGGTGCATTGGCTTTGGCCACTGAACCTCCCAATGATGGACTTATGCTAAGACCCCCAGTTGGAAGGACAACAAATTTTATCACCAAACCCATGTGGAGGAATATTTTTGGTCAAAGTTTATATCAACTAATTGTCCTTGCGGTCCTCACTTTTGATGGGAAGAGGCTACTGAGAATTAATGGTCCAGATGCGACTATAGTGCTCAACACTTTGATATTCAACTCCTTTGTATTTTGCCAGGTTTTCAATGAGATAAACAGCCGAGAAATCGAAAAGATAAACATATTCAAAGGCATGTTTGAGAGCTGGATATTTTTCACGGTGATATTCTCCACAGTGGTGTTTCAAGTACTCATAGTTGAGTTCCTGGGAACATTTGCCAGCACAGTGCCTCTAAGCTGGCAATTCTGGGTGCTCAGCGTTGTAATAGGAGCATTTAGCATGCCTATATCTGTCATACTCAAGTGCATTCCAGTTGAAAGAGGAGGTATTACAACGCACCATGATGGTTATGAGGCACTACCTTCTGGTCCCGAGCTAGCATAA 2625 0.4145 MFVWEALHDLTLMILMVCAIVSIAIGLPTEGWPKGVYDGLGIILSIFLVVIVTAISDYQQSLQFRDLDKEKKKIFVQVTRDRKRQKVSIYDLVVGDIVHLSTGDQVPADGIYISGYSLVIDESSLTGESEPVNIDEERPFLLSGTKVQDGQGKMIVTTVGMRTEWGKLMETLSEGGEDETPLQVKLNGVATVIGKIGLTFSVLTFVVLTIRFVVEKAVRGEFASWSSNDALKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMKDKALVRHLSACETMGSATCICTDKTGTLTTNHMVVNKIWICGKINEIKGNESIDKLKTEISEEVLSILLRSIFQNTSSEVVKDKDGKTTILGTPTESALLEFGLLAGGDFEAQRGTYKILKVVPFNSVRKKMSVLVGLPDGGVQAFCKGASEIVLKLCNKVIDPNGTAVDLSDEQAKKVSDIINGFANEALRTLCLALKDVNGTQGESSIPEDSYTLIAIVGIKDPVRPGVREAVKTCLAAGITVRMVTGDNINTARAIARECGILTEDGVAIEGPHFRDLSTEQMKSIIPRIQVMARSLPLDKHTLVTRLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFTTIVNVARWGRAIYINIQKFVQFQLTVNIVALIINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMLRPPVGRTTNFITKPMWRNIFGQSLYQLIVLAVLTFDGKRLLRINGPDATIVLNTLIFNSFVFCQVFNEINSREIEKINIFKGMFESWIFFTVIFSTVVFQVLIVEFLGTFASTVPLSWQFWVLSVVIGAFSMPISVILKCIPVERGGITTHHDGYEALPSGPELA 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01019 874 SUPERFAMILY Calcium ATPase, transduction domain A 75 171 IPR008250 -
Gma10g01019 874 Gene3D - 609 852 - -
Gma10g01019 874 Gene3D - 155 302 - -
Gma10g01019 874 Gene3D - 303 493 IPR023299 GO:0000166
Gma10g01019 874 CDD P-type_ATPase_Ca_PMCA-like 2 724 - -
Gma10g01019 874 PRINTS H+-transporting ATPase (proton pump) signature 448 466 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma10g01019 874 PRINTS H+-transporting ATPase (proton pump) signature 591 607 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma10g01019 874 PRINTS H+-transporting ATPase (proton pump) signature 623 648 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma10g01019 874 SUPERFAMILY HAD-like 289 696 IPR036412 -
Gma10g01019 874 Pfam E1-E2 ATPase 75 269 - -
Gma10g01019 874 SFLD C1.7: P-type atpase like 272 644 - -
Gma10g01019 874 PRINTS P-type cation-transporting ATPase superfamily signature 121 135 - -
Gma10g01019 874 PRINTS P-type cation-transporting ATPase superfamily signature 290 304 - -
Gma10g01019 874 PRINTS P-type cation-transporting ATPase superfamily signature 488 499 - -
Gma10g01019 874 PRINTS P-type cation-transporting ATPase superfamily signature 510 520 - -
Gma10g01019 874 PRINTS P-type cation-transporting ATPase superfamily signature 591 610 - -
Gma10g01019 874 PRINTS P-type cation-transporting ATPase superfamily signature 615 627 - -
Gma10g01019 874 Pfam Cation transporting ATPase, C-terminus 676 849 IPR006068 -
Gma10g01019 874 Gene3D - 494 608 IPR023214 -
Gma10g01019 874 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 556 679 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma10g01019 874 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 42 312 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma10g01019 874 Gene3D - 75 154 - -
Gma10g01019 874 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 2 853 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Gma10g01019 874 PANTHER CALCIUM-TRANSPORTING ATPASE 1 858 - -
Gma10g01019 874 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 852 IPR023298 -
Gma10g01019 874 ProSitePatterns E1-E2 ATPases phosphorylation site. 292 298 IPR018303 -
Gma10g01019 874 SFLD p-type atpase 272 644 IPR044492 -
Gma10g01019 874 PANTHER CATION TRANSPORTING ATPASE 1 858 - -
Gma10g01019 874 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 296 500 IPR023299 GO:0000166
Gma10g01019 874 Pfam Cation transport ATPase (P-type) 346 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01019 Gma-Chr10 26991708 26996238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01019 1 871 Primary Pumps ATPases AT2G41560 75.917 0.0 1362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01019 K01537 - gmx:100785768 1691.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01019 10 26991708 26996238 Gma10g01019 10 26991708 26996238 ECH
Gma10g01019 10 26991708 26996238 Gma02g01751 02 39071432 39083184 GST
Gma19g01294 19 42133406 42144133 Gma10g01019 10 26991708 26996238 PCT
Gma03g01245 03 38365039 38377734 Gma10g01019 10 26991708 26996238 PCT
Gma10g01019 10 26991708 26996238 Gma19g01294 19 42133406 42144133 PCT
Gma10g01019 10 26991708 26996238 Gma03g01245 03 38365039 38377734 PCT