Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01011 ATGTCCTATAACGCATTATCACGGAAGGAAGGCTTAGTTGAGGCTTCATCTTGGTTCAAGGCTCCTCAGAAGCACCAGAAATATGTTTCTTATGTTCTTGGCCTTCCCATGTCAAAGGTAGTTTGCAAAACAAAACGAGTTGGTGGTGGATTTGGGGGGAAGGAGACAAGATCAGCCTTTATTGCTGTTGCTGCTTCAGTTCCATCTTATCTTTTAAATCGACCAGTGAAAATCACGCTGGACCGAGATGTGGACATGATGATAACTGGGCAACAGCATAGTTTTCTAGGGAAGTACAAGGATACTAGCTCAACTTTGTTTGTAAAGGTCAGAGCAAATGGGTCATGGACTTCAGAAGGCCAAGCAGGAGGGTCTAATAGCTCCTCTGATGGAATGGAAAGTGCAAAGGAGAAGCCTGTGATTATTCCTACTGTTCTCATCATGGTAGTTCTCATTGTTTTGTTGAGTTTATTACTGCTTCTCGTTTATGAGTTCATGAAAAATGGATCCTTGGATAAATGGATCTTCCCTTCATATCAAGGTCGAGATAGATTGTTAGATTGGACAACTCGTTCAAATATAGCCATAGCTATTGCACAAGGGATTGCATACTTTCATGAGCAGTGTAGGGATCGGATAATACATTGTGACATCAAACTGCAAAATATATTGGTAGACGAAAACTTTTGTCCCAAAGTATCTAATTTTGGGCTGGCCAAATTGATAAGAAGGGAGCACTCTCATGTGGTGACAATGGTTAGAGGCGCTAAAGGTTATTTGGCACCACAATGGGTTAGTAATCACCCTATAATTGTAAAAGCTGACGTTTACAACTATGGAATGCTTCTTTTAGAGATCATTGGTGGCAGGAGAAATCTTGACATGTCCTTTGGTGCTGAGGACTTTTTCTATCCTGGTTCAGCTTACAAGGAGATGACAAATGGGTCAATAATTAAGGTGGCAGATAGGAGATGA 975 0.4113 MSYNALSRKEGLVEASSWFKAPQKHQKYVSYVLGLPMSKVVCKTKRVGGGFGGKETRSAFIAVAASVPSYLLNRPVKITLDRDVDMMITGQQHSFLGKYKDTSSTLFVKVRANGSWTSEGQAGGSNSSSDGMESAKEKPVIIPTVLIMVVLIVLLSLLLLLVYEFMKNGSLDKWIFPSYQGRDRLLDWTTRSNIAIAIAQGIAYFHEQCRDRIIHCDIKLQNILVDENFCPKVSNFGLAKLIRREHSHVVTMVRGAKGYLAPQWVSNHPIIVKADVYNYGMLLLEIIGGRRNLDMSFGAEDFFYPGSAYKEMTNGSIIKVADRR 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01011 324 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 95 159 - -
Gma10g01011 324 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 160 324 - -
Gma10g01011 324 Pfam Molybdopterin cofactor-binding domain 13 100 IPR008274 GO:0016491
Gma10g01011 324 SUPERFAMILY Protein kinase-like (PK-like) 158 296 IPR011009 -
Gma10g01011 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Gma10g01011 324 SUPERFAMILY Molybdenum cofactor-binding domain 10 100 IPR037165 GO:0016491
Gma10g01011 324 Gene3D Transferase(Phosphotransferase) domain 1 166 323 - -
Gma10g01011 324 ProSiteProfiles Protein kinase domain profile. 41 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01011 324 Gene3D Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 2 89 - -
Gma10g01011 324 Pfam Protein kinase domain 159 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01011 324 SMART serkin_6 87 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g01011 324 PANTHER OS07G0415500 PROTEIN 95 159 - -
Gma10g01011 324 PANTHER OS07G0415500 PROTEIN 160 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01011 Gma-Chr10 26694318 26696795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01011 160 324 Receptor kinase-like Gene Family AT5G20050 43.678 2.66e-43 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma10g01011 Pkinase 1.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01011 - - gmx:102670544 615.92