Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01010 ATGGGGAGATATTCAATACCCTTTATGGGTGTTCTGCTACTGTTCTGTCTGGTTTCATCTTCAGAGGCAGAATATTTGAAGTATAAAGACCCTAAGGCGCCACTGAATGTCAGAATCAGTGACTTGTTGAAGCGAATGTCTCTCGAAGAAAAGATAGGCCAGATGACACAGATTGAAAGGAGTGTTGCTACTCCTGATGTGATGAACAAGTACTTCATTGGGAGTGTGCTCAGTGGGGGAGGGAGTGTTCCGGCAACAAAGGCATCTGCTGCGAGCTGGCAGCAAATGGTGAATCAGATGCAAAAGGCAGCATTGTCTACTCGCCTTGGGATTCCAATGATTTATGGGATAGATGCAGTTCATGGACACAACAATGTCTACAATGCTACCGTTTTTCCTCACAATGTTGGGCTAGGAGTTACCAGGGATCCTGTGCTCATAAAGAAGATTGGAGAAGCAACTGCCCTTGAAGTTAGAGCTACTGGAATTCCGTATGTCTTTGCTCCATGCATTGCGGTCTGCAGAGATCCAAGATGGGGACGTTGCTATGAAAGCTACAGCGAGGACCCTAAGATTGTTAAAACTATGACTGAAATTATACCTGGTTTGCAAGGAGATATCCCTGGCAATTCCATTAAGGGAGTTCCCTTTGTTGCTGGAAAGAACAAGGTTGCAGCTTGTGCCAAGCACTACTTAGGAGATGGTGGCACAAACAAGGGAATCAATGAGAACAACACTCTGATCAGTTACAATGGACTGCTTAGCATTCACATGCCGGCATACTATGACTCTATCATCAAGGGTGTTTCAACAGTGATGATCTCGTACTCTAGCTGGAATGGGATGAAAATGCATGCAAACAAAAAACTTATCACTGGTTACCTCAAGAACAAATTGCATTTCAAGGGTTTTGTCATATCTGATTGGCAGGGTATTGACCGGATTACCTCTCCTCCTCATGCTAACTATTCATACTCTGTTCAAGCTGGTGTCAGTGCTGGAATTGATATGATTATGGTTCCCTTCAACTACACTGAGTTCATTGATGAACTAACCCGTCAAGTAAAGAATAATATTATCCCAATCAGCAGGATTGATGATGCCGTGGCAAGAATCTTAAGAGTAAAATTTGTCATGGGCCTATTTGAAAATCCATATGCTGATCCAAGCCTCGCAAACCAACTGGGTAGCAAGGAACATAGAGAAATAGCAAGGGAAGCTGTACGGAAATCCCTAGTGTTGCTAAAGAATGGTAAATCTTACAAGAAACCACTGCTTCCTCTTCCCAAAAAGTCCACAAAAATACTGGTAGCAGGAAGTCATGCTAACAATTTGGGTTATCAATGTGGAGGATGGACAATTACCTGGCAGGGGCTTGGTGGCAATGATCTCACTTCAGGTACAACCATCCTTGATGCTGTGAAACAAACCGTTGATCCTGCCACTGAAGTTGTCTTCAATGAAAATCCTGATAAGAACTTTGTCAAGTCATACAAATTTGACTATGCCATTGTTGTTGTGGGAGAACACACTTATGCCGAAACATTTGGTGACAGTTTGAATCTGACTATGGCTGATCCTGGTCCAAGTACCATCACCAATGTGTGTGGGGCTATTCGATGCGTAGTTGTTCTTGTCACTGGCCGCCCAGTTGTGATTAAGCCATATCTACCCAAAATCGATGCACTTGTAGCTGCATGGCTTCCTGGCACCGAAGGTCAAGGTGTCGCCGACGTTCTCTACGGCGACTATGAGTTCACCGGCAAGCTGGCAAGAACATGGTTCAAGACAGTTGACCAGCTCCCAATGAATGTTGGTGATAAACATTATGATCCTCTATTTCCATTTGGATATGGGTTAACTACAAACATCACTAAATATTGA 1884 0.4363 MGRYSIPFMGVLLLFCLVSSSEAEYLKYKDPKAPLNVRISDLLKRMSLEEKIGQMTQIERSVATPDVMNKYFIGSVLSGGGSVPATKASAASWQQMVNQMQKAALSTRLGIPMIYGIDAVHGHNNVYNATVFPHNVGLGVTRDPVLIKKIGEATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPKIVKTMTEIIPGLQGDIPGNSIKGVPFVAGKNKVAACAKHYLGDGGTNKGINENNTLISYNGLLSIHMPAYYDSIIKGVSTVMISYSSWNGMKMHANKKLITGYLKNKLHFKGFVISDWQGIDRITSPPHANYSYSVQAGVSAGIDMIMVPFNYTEFIDELTRQVKNNIIPISRIDDAVARILRVKFVMGLFENPYADPSLANQLGSKEHREIAREAVRKSLVLLKNGKSYKKPLLPLPKKSTKILVAGSHANNLGYQCGGWTITWQGLGGNDLTSGTTILDAVKQTVDPATEVVFNENPDKNFVKSYKFDYAIVVVGEHTYAETFGDSLNLTMADPGPSTITNVCGAIRCVVVLVTGRPVVIKPYLPKIDALVAAWLPGTEGQGVADVLYGDYEFTGKLARTWFKTVDQLPMNVGDKHYDPLFPFGYGLTTNITKY 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01010 627 PRINTS Glycosyl hydrolase family 3 signature 108 124 IPR001764 GO:0004553|GO:0005975
Gma10g01010 627 PRINTS Glycosyl hydrolase family 3 signature 132 151 IPR001764 GO:0004553|GO:0005975
Gma10g01010 627 PRINTS Glycosyl hydrolase family 3 signature 178 194 IPR001764 GO:0004553|GO:0005975
Gma10g01010 627 PRINTS Glycosyl hydrolase family 3 signature 224 240 IPR001764 GO:0004553|GO:0005975
Gma10g01010 627 PRINTS Glycosyl hydrolase family 3 signature 294 312 IPR001764 GO:0004553|GO:0005975
Gma10g01010 627 Gene3D - 21 396 IPR036962 GO:0004553|GO:0005975
Gma10g01010 627 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 412 621 IPR036881 GO:0004553|GO:0005975
Gma10g01010 627 PANTHER - 9 625 - -
Gma10g01010 627 SUPERFAMILY (Trans)glycosidases 26 411 IPR017853 -
Gma10g01010 627 Pfam Glycosyl hydrolase family 3 N terminal domain 48 375 IPR001764 GO:0004553|GO:0005975
Gma10g01010 627 Pfam Glycosyl hydrolase family 3 C-terminal domain 412 621 IPR002772 GO:0004553|GO:0005975
Gma10g01010 627 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 9 625 - -
Gma10g01010 627 Gene3D - 397 624 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01010 Gma-Chr10 26678983 26683459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01010 9 622 Glycoside Hydrolase AT5G20950 76.384 0.0 967
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01010 K05349 - gmx:547729 1259.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01010 10 26678983 26683459 Gma02g01758 02 39932708 39946129 GST