Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01003 ATGGCAAAGAGGAAGAGCTGGTTTGGATGGGTAAAAAGGCTATTCACTTCTGAGTCAAAGGACAACAAAAAGCCAAACAGATGGGGGTGGAGTTTTGGAAGGATTAAGCAGAAACAGTATCCTACAATTACAGCTCCAAATAGGACACTGATTGAAGCAAGTGAAGAGCAGAGAAAGCATGCTTTAACCGTCGCTATTGCAACTGCAGCAGCTGCTGAGGCTGCAGTTGCTGCTGCACATGCTGCTGCTGAGGTTGTCAAGCTCACTGGCACTTCTCGCTCTTACTCATATCTTTCCAAGGGAGACAAAAGTTTAGCTGCCATCAAGATTCAAAGCACGTACCGTGCACATCTTGCTAGGAAAGCATTAAGAGCATTGAAAGGAGTTATAAGACTTCAAGCCATAATTCGGGGTCAAGCTGTGAGACGTCAAGTGTCAAACAACATTTTGCAGAATTTTCCCTCCAATGTAAGAAATCAGGTGGGAATTCAGGAAAGAAGCAGCCATAATACTGCTGAACAGATCCAGCAAAGTCCAAAGCAGAAGAAAAAGATAGAAGAGAAGGAACTGAAGTCTGAATGCCATGGTCAAAGAACATGGGATTGTAGCTTGCTCTCAAGAGAAGACATTGAAGCTATATGGTTTAGAAAACAAGAGGCCATGGTCAAAAGAGAGCGCATGAAACAGTACTCTTCTTCACAAAGGGAGACAAAAAATAACCAAATGTTGGAAGAATCTGTACACAACAAGGACTTCGGAAGAGAGAGCTGCCACACACTTGGAGATTGGCTACATCAAGAAACACGTGATTGGGATTTGGTTTATAAACCAACTCTTACTTCAAACTTGATAACAACAAAAAAAGAATTTCAAGAAGGGTTGAGTACACAAACTTCAATCCCAAGGAAATCATTTTCTCTTGTAAAAAGAAGCTTAAATGGGGATGAGAGTTCCATGTCAAATTCTCTAGTTTTTCCCACTTACATGGCTGTTACTGAATCCAGCAAAGCAAAGATGAGGTCTATTAGCACACCAAAGCAAAGAACAGGAATTCTGGATATATGCTCCAATCAGAATGAGCCTCACAAGGAAGGCATTTTCTTTGGCTCTTCTTATTATGGTGCAACTAGTAGCACCAATGAAAACAGTGCAAGTTATCAACAAAGATGCTAG 1173 0.4135 MAKRKSWFGWVKRLFTSESKDNKKPNRWGWSFGRIKQKQYPTITAPNRTLIEASEEQRKHALTVAIATAAAAEAAVAAAHAAAEVVKLTGTSRSYSYLSKGDKSLAAIKIQSTYRAHLARKALRALKGVIRLQAIIRGQAVRRQVSNNILQNFPSNVRNQVGIQERSSHNTAEQIQQSPKQKKKIEEKELKSECHGQRTWDCSLLSREDIEAIWFRKQEAMVKRERMKQYSSSQRETKNNQMLEESVHNKDFGRESCHTLGDWLHQETRDWDLVYKPTLTSNLITTKKEFQEGLSTQTSIPRKSFSLVKRSLNGDESSMSNSLVFPTYMAVTESSKAKMRSISTPKQRTGILDICSNQNEPHKEGIFFGSSYYGATSSTNENSASYQQRC 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01003 390 Gene3D - 102 150 - -
Gma10g01003 390 MobiDBLite consensus disorder prediction 165 189 - -
Gma10g01003 390 PANTHER IQ-DOMAIN 5-RELATED 1 382 - -
Gma10g01003 390 Pfam IQ calmodulin-binding motif 106 124 IPR000048 GO:0005515
Gma10g01003 390 Pfam Protein of unknown function (DUF4005) 318 353 IPR025064 -
Gma10g01003 390 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Gma10g01003 390 SMART iq_5 102 124 IPR000048 GO:0005515
Gma10g01003 390 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
Gma10g01003 390 PANTHER IQ-DOMAIN 12 1 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01003 Gma-Chr10 26439681 26442416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g01003 1 390 IQD Protein Family AT5G03960 44.096 9.54e-76 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01003 - - gmx:100800767 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01003 10 26439681 26442416 Gma10g01003 10 26439681 26442416 ECH