Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00986 ATGACAGGACCTGCTGTTAATCATAGTGGCAGAATGGATCTACAGCAAATTGAAGCTCTGGGTGCTAATTATGCTGGTGGAAACAACCATCTGATTACTTTGATTTGTGGTGCAGAGGAATACGAGTCTTTCAATGAAGTAGACCGGTCAATAATGGATTACCCAAGTCATGAAGTTGATCTTGACGAGGAGGATCTAGATATTCCATGGAGTGAACTTATTTTGAAGGAGAACATTGGGACAGTGAATGTTTTTTTTTCAAGTTGCTTATCTACTTCCTTTGCAGTCATGAGTTTCTTCCACTGCAGCAAGCGAACATTGGCAGCAGTGACTGCAAGGATTCAGATCTGGTGGAAGAGGGATTTGGTGCCAGAGGAGGATGTTGCTGTGAAGATTCTTAAAGTGCAAGGTTTTGATCCTGGACGATTTGAAGAATTTCTAAAGGAGGTCTCACTCATGAAGCGCCTCCGGCATCCAAATATTGTACTTTTGATGGGTGCAGTTATTCAACCCTCAAAGTTATCAATAGTAACAGAATATTTGTCAAGTTTGTATGAACTTCTACACATGCCCAATGTGGGATCATCACTTAGTGAGAAGCGTTGTTTAAGTATGGCTTATGATGTCGCAAGCGGAATGAATTATCTTCATCAAATGAGACCTCCTATTGTTCATAGAGATTTGAAGTCTCCAAATCTTTTGGTTGATGATTCATACACTGTTAAGGTATGTGATTTTGGCCTTTCACGTACAAAGGCAAACACATTTCTTTCATCTAAAACCGCTGCCGGAACTCCTGAATGGATGGCACCCGAAGTCATCCGAGGAGAACTGTCAAATGAAAAATGTGATGTATTCAGCTTTGGTGTAATCTTGTGGGAACTAGTGACCCTGCAACAACCATGGAGACAATTAAATCCTTCACAGGTTGTTGCAGCTGTCGGTTTTATGGGCAAAAGGCTAGAGATTCCAAGGCATGTGAATCCTCAAGTGGCTGCCTTGATTGAGCTTTGCTGGGCCACGGTCGGGGTAGTAGCCCAGGCTAAACAAGTACTAATAGACCAAGCGGGTCACAAGCAGCACAGACAGAGAGGCCCAAAAGAAGAATCACAGCTCCTCGAAGGTTCCAGGATTTCGTGTGAGCGATGCTGA 1152 0.4306 MTGPAVNHSGRMDLQQIEALGANYAGGNNHLITLICGAEEYESFNEVDRSIMDYPSHEVDLDEEDLDIPWSELILKENIGTVNVFFSSCLSTSFAVMSFFHCSKRTLAAVTARIQIWWKRDLVPEEDVAVKILKVQGFDPGRFEEFLKEVSLMKRLRHPNIVLLMGAVIQPSKLSIVTEYLSSLYELLHMPNVGSSLSEKRCLSMAYDVASGMNYLHQMRPPIVHRDLKSPNLLVDDSYTVKVCDFGLSRTKANTFLSSKTAAGTPEWMAPEVIRGELSNEKCDVFSFGVILWELVTLQQPWRQLNPSQVVAAVGFMGKRLEIPRHVNPQVAALIELCWATVGVVAQAKQVLIDQAGHKQHRQRGPKEESQLLEGSRISCERC 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00986 383 Gene3D Transferase(Phosphotransferase) domain 1 183 351 - -
Gma10g00986 383 Pfam Protein tyrosine and serine/threonine kinase 124 340 IPR001245 GO:0004672|GO:0006468
Gma10g00986 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Gma10g00986 383 Gene3D Phosphorylase Kinase; domain 1 116 182 - -
Gma10g00986 383 SUPERFAMILY Protein kinase-like (PK-like) 121 340 IPR011009 -
Gma10g00986 383 CDD STKc_MAP3K-like 126 341 - -
Gma10g00986 383 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 44 355 - -
Gma10g00986 383 ProSiteProfiles Protein kinase domain profile. 100 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00986 383 SMART serkin_6 120 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00986 383 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 44 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00986 Gma-Chr10 25185162 25199433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00986 47 341 MAP Kinase Kinase Kinase AT5G03730 60.201 1.01e-109 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gma10g00986 PK_Tyr_Ser-Thr 1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00986 K14510 - gmx:100813948 571.622