Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00978 ATGTGTTCTTGCACCCCAAGCTTTGCTTGTTCTTCATCCACCAAGAAGAGGAAGCTTTGCAACAAAGCCAATGTTGGTTCAAGAAATAAGAAGTTAAAGAATGAAGATGATGAGGTTTGGAAGATCAAGAAAGTGTTGAAAGAGAGCGATGTTGGGAGCATGAGCAGGTTGATACTGACGAGAGAAATGGCAGAGAAGTTTGTGCTGCCTGTGTTGGGGGATGATGCTGATCAGATTGATAGTGGAGTTTCTGTTCAGATTTGGGATGCGGACACCAACTCCATGCACTCTCTTGTTTTCAAGAGATGGGTCTCTTCAAGAAGCTATGTCTTCATTGGTAATTGGATTAAAGATTTTGTTGCAAGAAGGGGTTTAAGGAAAGGAGATGAGATTGGTTTTCAATGGAATCCATTCAAGAATGGCTTTGAATTCTCTGTTCTTCAAGTCAACTACATGGGATAG 462 0.4134 MCSCTPSFACSSSTKKRKLCNKANVGSRNKKLKNEDDEVWKIKKVLKESDVGSMSRLILTREMAEKFVLPVLGDDADQIDSGVSVQIWDADTNSMHSLVFKRWVSSRSYVFIGNWIKDFVARRGLRKGDEIGFQWNPFKNGFEFSVLQVNYMG 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00978 153 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 13 148 - -
Gma10g00978 153 SUPERFAMILY DNA-binding pseudobarrel domain 37 141 IPR015300 -
Gma10g00978 153 CDD B3_DNA 40 147 IPR003340 GO:0003677
Gma10g00978 153 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 13 148 - -
Gma10g00978 153 Gene3D - 28 147 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00978 Gma-Chr10 24273894 24274355 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00978 26 134 RAV Transcription Factor Family AT1G68840 33.043 1.05e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00978 - - gmx:102663812 316.235