Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00975 ATGGGTAACTGCTGCGTTGTGCCTTCCGGTCAAACAAGAAAAGAAAAAAAACAAAAGAAGAAGTGGAATCCCTACGAGGACGGGTGGGGGAAGAAGCTGGTGGTGCTGACGGAGCCCACGGGCCGGGACATCGGGCTGCGTTACGACCTGGGCCGGGAGCTGGGCCGAGGTGAGTTCGGGGTAACATATCTGTGCCAAGACAGGGAGACGAAGGAGGAGTTAGCATGCAAGAGCATTTCAAAGAAGAAGCTTCGAACCGCGATAGATATCGAGGACGTGAGGAGGGAGGTGGAGATCATGCGGCTCTTGCCTAAACACCCGAACGTCGTGTCGTTGAAGGACACATACGAAGATGACAATGCCGTTCACCTCGTCATGGAGCTCTGCGAGGGCGGCGAGCTCTTCGACCGTATCGTGGCGCGTGGCCACTACACCGAGCGCGCCGCCGCCACCGTCACCAGAACCATTGTCGAAGTCGTGCAGATGTGCCACAAACATGGCGTGATGCATCGTGATCTCAAACCTGAGAACTTTTTGTTTGGAAACAAGAAGGAAACAGCACCTTTGAAAGCTATTGACTTTGGATTGTCGGTTTTATTCAAACCAGGTGAAAGATTTAACGAGATAGTTGGAAGTCCATATTACATGGCTCCTGAGGTATTAAAGCGTAATTATGGCCCTGAAGTAGATATCTGGAGTGCTGGAGTAATTCTCTACATCTTACTTTGTGGCGTCCCACCGTTTTGGGCAGAAACTGAAAAGGGAGTTGCTCAAGCTATTATTCGATCTGTTGTTGATTTTAAAAGGGAGCCATGGCCGAAGGTTTCTGATAATGCAAAAGACCTTGTGAAGAAGATGCTTGATCCTGACCCAAAGTGCCGTCTTACTGCACAAGAAGTGTTAGATCATCCGTGGTTACAGAATGAAAAGAAAGCCCCTAATGTTTCATTGGGAGAAACTGTTAGATCAAGGCTCATGCAATTTTCTGTAATGAACAAGCTTAAGAAAAGAGCTTTGAGGGTGATTGGAGAGTTTTTGTCTTTAGAAGAAGCTGCTGGAATAAAAGAGGGATTCCAGCTAATGGATACAAGCAATAAAGGCAAGATTAACATGGATGAGCTGCGAGTAGGGTTGCATAAACTAGGTCACCAAATTCCTGATGGGGATGTCCAAATACTTATGGATGCTGGTGATGTAGACAACGATGGGTACCTAGATTATGGCGAGTTTGTAGCCATTTCTATTCATCTGAGAAAGATAGACAAGGATGAGCACCTTCACAAAGCCTTCCAATTTTTCGATAAGAACCAAAGTGGATATATTGAAATTGAGGAGTTACATAATGCCTTAGTTGATGAGATTGAAACAAACAGTGAAGAAGTCATTAATGCAATTATGCATGATGTGGACACAGATAAGGATGGAAAAATAAGTTATGAGGAATTTGCTGCAATGATGAAAGCAGGCACAGATTGGAGGAAAGCATCGAGGCAGTATTCAAGAGAGAGGTTCTCTAGCTTAAGTCAGAAATTGATCAAGGACGGATCTTTGCAATTGAACAATGATGACGGTAGTAGACTTTATTAG 1587 0.4524 MGNCCVVPSGQTRKEKKQKKKWNPYEDGWGKKLVVLTEPTGRDIGLRYDLGRELGRGEFGVTYLCQDRETKEELACKSISKKKLRTAIDIEDVRREVEIMRLLPKHPNVVSLKDTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAATVTRTIVEVVQMCHKHGVMHRDLKPENFLFGNKKETAPLKAIDFGLSVLFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEKGVAQAIIRSVVDFKREPWPKVSDNAKDLVKKMLDPDPKCRLTAQEVLDHPWLQNEKKAPNVSLGETVRSRLMQFSVMNKLKKRALRVIGEFLSLEEAAGIKEGFQLMDTSNKGKINMDELRVGLHKLGHQIPDGDVQILMDAGDVDNDGYLDYGEFVAISIHLRKIDKDEHLHKAFQFFDKNQSGYIEIEELHNALVDEIETNSEEVINAIMHDVDTDKDGKISYEEFAAMMKAGTDWRKASRQYSRERFSSLSQKLIKDGSLQLNNDDGSRLY 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00975 528 CDD STKc_CAMK 47 305 - -
Gma10g00975 528 SUPERFAMILY EF-hand 330 499 IPR011992 -
Gma10g00975 528 PANTHER SERINE/THREONINE-PROTEIN KINASE 11 503 - -
Gma10g00975 528 Gene3D Phosphorylase Kinase; domain 1 50 133 - -
Gma10g00975 528 ProSiteProfiles EF-hand calcium-binding domain profile. 457 492 IPR002048 GO:0005509
Gma10g00975 528 Gene3D - 315 489 - -
Gma10g00975 528 SMART efh_1 353 381 IPR002048 GO:0005509
Gma10g00975 528 SMART efh_1 425 453 IPR002048 GO:0005509
Gma10g00975 528 SMART efh_1 461 489 IPR002048 GO:0005509
Gma10g00975 528 SMART efh_1 389 417 IPR002048 GO:0005509
Gma10g00975 528 SUPERFAMILY Protein kinase-like (PK-like) 47 315 IPR011009 -
Gma10g00975 528 ProSiteProfiles EF-hand calcium-binding domain profile. 421 456 IPR002048 GO:0005509
Gma10g00975 528 Pfam EF-hand domain pair 366 412 IPR002048 GO:0005509
Gma10g00975 528 ProSiteProfiles EF-hand calcium-binding domain profile. 349 384 IPR002048 GO:0005509
Gma10g00975 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Gma10g00975 528 Gene3D Transferase(Phosphotransferase) domain 1 134 314 - -
Gma10g00975 528 SMART serkin_6 48 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00975 528 ProSitePatterns EF-hand calcium-binding domain. 398 410 IPR018247 -
Gma10g00975 528 ProSiteProfiles Protein kinase domain profile. 48 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00975 528 Pfam EF-hand domain pair 424 487 IPR002048 GO:0005509
Gma10g00975 528 ProSitePatterns EF-hand calcium-binding domain. 470 482 IPR018247 -
Gma10g00975 528 ProSitePatterns Protein kinases ATP-binding region signature. 54 77 IPR017441 GO:0005524
Gma10g00975 528 Pfam Protein kinase domain 48 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00975 528 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 11 503 - -
Gma10g00975 528 CDD EFh 425 487 IPR002048 GO:0005509
Gma10g00975 528 ProSitePatterns EF-hand calcium-binding domain. 434 446 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00975 Gma-Chr10 24070270 24074892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00975 1 523 EF-hand Containing Proteins AT5G19450 75.610 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma10g00975 Pkinase 6.1e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00975 K13412 - gmx:100778471 1056.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00975 10 24070270 24074892 Gma10g00975 10 24070270 24074892 ECH